RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 CARMIL3Q8ND23 1372 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-208ENST00000520228 DAPK3O43293 454 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 ADCY7P51828 1080 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 EPHB1P54762 984 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 MEF2AQ02078 507 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-208ENST00000520228 CLUL1Q15846 466 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 ZFYVE27Q5T4F4 411 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 BTNL9Q6UXG8 535 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 PLEKHH3Q7Z736 793 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 RAVER1Q8IY67 606 aaKnown RBP8.6□□□□□ -1.03
SDCBP-208ENST00000520228 TSPYL6Q8N831 410 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 CNBD1Q8NA66 436 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 FATE1Q969F0 183 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 HOOK2Q96ED9 719 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 TEKT5Q96M29 485 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 SLC2A13Q96QE2 648 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 BRIP1Q9BX63 1249 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 MYH16Q9H6N6 1097 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 TCF7L1Q9HCS4 588 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
SDCBP-208ENST00000520228 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 H0YIN7 160 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 KCNA3P22001 575 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 GPTP24298 496 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 CHRNA5P30532 468 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 EPHB4P54760 987 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 PPP2CBP62714 309 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 PPP2CAP67775 309 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 TWISTNBQ3B726 338 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-208ENST00000520228 TMEM240Q5SV17 173 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 PRR5LQ6MZQ0 368 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 TAS1R1Q7RTX1 841 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 GLB1L3Q8NCI6 653 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-208ENST00000520228 PAWRQ96IZ0 340 aaKnown RBP8.59□□□□□ -1.03
SDCBP-208ENST00000520228 ACE2Q9BYF1 805 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-208ENST00000520228 SLC6A15Q9H2J7 730 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 SEC61A2Q9H9S3 476 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 NR2E1Q9Y466 385 aa8.59□□□□□ -1.03
SDCBP-208ENST00000520228 RBM8AQ9Y5S9 174 aaKnown RBP8.59□□□□□ -1.03
SDCBP-208ENST00000520228 PXDNLA1KZ92 1463 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 PMS2P1A4D2B8 440 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 XPOTO43592 962 aaKnown RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 ABLIM3O94929 683 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 C5AR1P21730 350 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 KIR2DL3P43628 341 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 RECQLP46063 649 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 CCT2P78371 535 aaKnown RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 ATP2C1P98194 919 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 TCIRG1Q13488 830 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 SURF1Q15526 300 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 PNMA8AQ86V59 439 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 C2CD5Q86YS7 1000 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 ZNF34Q8IZ26 560 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 ZDHHC14Q8IZN3 488 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 PLBD2Q8NHP8 589 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 GCDHQ92947 438 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-208ENST00000520228 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 MEGF9Q9H1U4 602 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 ZCCHC4Q9H5U6 513 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 KDM3BQ7LBC6 1761 aa8.58□□□□□ -1.04
SDCBP-208ENST00000520228 COL24A1Q17RW2 1714 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 TCERG1O14776 1098 aaKnown RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 MTSS1O43312 755 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 AKAP10O43572 662 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 LTA4HP09960 611 aaKnown RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 CCND1P24385 295 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 CTSSP25774 331 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 CNR2P34972 360 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 RAB27AP51159 221 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 PPP3CAQ08209 521 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 MALLQ13021 153 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 ACAP2Q15057 778 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 UBE3CQ15386 1083 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 PARP10Q53GL7 1025 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 C19orf54Q5BKX5 351 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 SUSD4Q5VX71 490 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 ARHGEF18Q6ZSZ5 1173 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 CPA6Q8N4T0 437 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 MSL3Q8N5Y2 521 aaKnown RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 UIMC1Q96RL1 719 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 GREM2Q9H772 168 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 METTL14Q9HCE5 456 aaKnown RBP8.57□□□□□ -1.04
SDCBP-208ENST00000520228 KLHL42Q9P2K6 505 aa8.57□□□□□ -1.04
SDCBP-208ENST00000520228 ATP10DQ9P241 1426 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms