RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ZIC5Q96T25 663 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 UVRAGQ9P2Y5 699 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 GINS2Q9Y248 185 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 GPR32O75388 356 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 YWHAEP62258 255 aaKnown RBP28.83■■■□□ 2.21
COL13A1-212ENST00000520133 IRX5P78411 483 aaPredicted RBP28.83■■■□□ 2.21
COL13A1-212ENST00000520133 PPP1R2P3Q6NXS1 205 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 CC2D1AQ6P1N0 951 aaPredicted RBP28.83■■■□□ 2.21
COL13A1-212ENST00000520133 ACAP3Q96P50 834 aa28.83■■■□□ 2.21
COL13A1-212ENST00000520133 DUSP11O75319 330 aaKnown RBP28.82■■■□□ 2.2
COL13A1-212ENST00000520133 PSMC4P43686 418 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 ADAM17P78536 824 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 TMEM62Q0P6H9 643 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 MFSD14CQ5VZR4 134 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 SCARA3Q6AZY7 606 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 JADE1Q6IE81 842 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 CATSPER4Q7RTX7 472 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 HNRNPLLQ8WVV9 542 aaKnown RBP28.82■■■□□ 2.2
COL13A1-212ENST00000520133 FAXDC2Q96IV6 333 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 RNF216Q9NWF9 866 aaPredicted RBP28.82■■■□□ 2.2
COL13A1-212ENST00000520133 ZNF446Q9NWS9 450 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 SMARCAL1Q9NZC9 954 aa28.82■■■□□ 2.2
COL13A1-212ENST00000520133 MROH7Q68CQ1 1323 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 CYP1A1P04798 512 aaPredicted RBP28.81■■■□□ 2.2
COL13A1-212ENST00000520133 NFICP08651 508 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 KRT19P08727 400 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 MYBL1P10243 752 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 GNAT1P11488 350 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 ZNF132P52740 706 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 PTPROQ16827 1216 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 ACTRT1Q8TDG2 376 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 XYLT2Q9H1B5 865 aa28.81■■■□□ 2.2
COL13A1-212ENST00000520133 THAP12O43422 761 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 KPNA6O60684 536 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CALCAP01258 141 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 NSFP46459 744 aaKnown RBP28.8■■■□□ 2.2
COL13A1-212ENST00000520133 SLC10A6Q3KNW5 377 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 NT5DC4Q86YG4 428 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CD302Q8IX05 232 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 ZNF564Q8TBZ8 553 aaPredicted RBP28.8■■■□□ 2.2
COL13A1-212ENST00000520133 NUP85Q9BW27 656 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CCDC94Q9BW85 323 aaPredicted RBP28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CISHQ9NSE2 258 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 C17orf102A2RUQ5 167 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CEP104O60308 925 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 GRM5P41594 1212 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CENPCQ03188 943 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 RUFY4Q6ZNE9 571 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 C1orf127Q8N9H9 656 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 CNOT8Q9UFF9 292 aaKnown RBP28.8■■■□□ 2.2
COL13A1-212ENST00000520133 ALG6Q9Y672 507 aa28.8■■■□□ 2.2
COL13A1-212ENST00000520133 ATMINO43313 823 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 ZRANB2O95218 330 aaKnown RBP eCLIP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 TBC1D8O95759 1140 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 DARSP14868 501 aaKnown RBP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 FGFR4P22455 802 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 VSNL1P62760 191 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 LACTBP83111 547 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 PURAQ00577 322 aaKnown RBP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 TMEM132DQ14C87 1099 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 ZNF667Q5HYK9 610 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 MCOLN2Q8IZK6 566 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 USP38Q8NB14 1042 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 DNAJB3Q8WWF6 145 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 OSMRQ99650 979 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 RBM12Q9NTZ6 932 aaKnown RBP28.79■■■□□ 2.2
COL13A1-212ENST00000520133 C2CD2Q9Y426 696 aa28.79■■■□□ 2.2
COL13A1-212ENST00000520133 MIF4GDA9UHW6 222 aaKnown RBP28.78■■■□□ 2.2
COL13A1-212ENST00000520133 ATP8B1O43520 1251 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 CD58P19256 250 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 ATICP31939 592 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 SLC27A1Q6PCB7 646 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 C7orf31Q8N865 590 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 PPP1R13LQ8WUF5 828 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 RUBCNQ92622 972 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 CYFIP2Q96F07 1278 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 RPS6KC1Q96S38 1066 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 AVENQ9NQS1 362 aaPredicted RBP28.78■■■□□ 2.2
COL13A1-212ENST00000520133 SIX4Q9UIU6 781 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 PGRMC1O00264 195 aaKnown RBP28.78■■■□□ 2.2
COL13A1-212ENST00000520133 TREHO43280 583 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 C6orf222P0C671 652 aaPredicted RBP28.78■■■□□ 2.2
COL13A1-212ENST00000520133 ASPAP45381 313 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 GLE1Q53GS7 698 aaKnown RBP28.78■■■□□ 2.2
COL13A1-212ENST00000520133 NAA35Q5VZE5 725 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 CYP4F22Q6NT55 531 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 NOTUMQ6P988 496 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 CPA5Q8WXQ8 436 aa28.78■■■□□ 2.2
COL13A1-212ENST00000520133 TRIP11Q15643 1979 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 MEFVO15553 781 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-212ENST00000520133 ITGB3P05106 788 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 CYBAP13498 195 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 EIF4BP23588 611 aaKnown RBP28.77■■■□□ 2.2
COL13A1-212ENST00000520133 AXLP30530 894 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 HIC1Q14526 733 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 TRPV1Q8NER1 839 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 ZNF606Q8WXB4 792 aa28.77■■■□□ 2.2
COL13A1-212ENST00000520133 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.77■■■□□ 2.2
COL13A1-212ENST00000520133 KIF3CO14782 793 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 DDX3YO15523 660 aaKnown RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms