RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 SPP2Q13103 211 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 GIT2Q14161 759 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 EZH2Q15910 746 aaKnown RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 MAN2A1Q16706 1144 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 NKPD1Q17RQ9 610 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ZNF792Q3KQV3 632 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 CERKLQ49MI3 558 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 FILIP1LQ4L180 1135 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 VWA3BQ502W6 1294 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ZNF569Q5MCW4 686 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 FAM26FQ5R3K3 315 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 BEND6Q5SZJ8 279 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 TDRD10Q5VZ19 366 aaKnown RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 NCAPH2Q6IBW4 605 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 CATSPER3Q86XQ3 398 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 SPACA3Q8IXA5 215 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 DAW1Q8N136 415 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 MFSD4AQ8N468 514 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 AGBL5Q8NDL9 886 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 SMCR8Q8TEV9 937 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 SLC5A5Q92911 643 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ZNF622Q969S3 477 aaKnown RBP eCLIP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 CCDC34Q96HJ3 373 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 TEPSINQ96N21 525 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 UIMC1Q96RL1 719 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PSMD1Q99460 953 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 TM9SF2Q99805 663 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PARD6BQ9BYG5 372 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 NDST4Q9H3R1 872 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PSTPIP2Q9H939 334 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 COL20A1Q9P218 1284 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 MYO1AQ9UBC5 1043 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 HDAC6Q9UBN7 1215 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ZNF70Q9UC06 446 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-212ENST00000519622 ZBTB21Q9ULJ3 1066 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 STRIP2Q9ULQ0 834 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 TMX2Q9Y320 296 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PCDHA1Q9Y5I3 950 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 DUSP10Q9Y6W6 482 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PITPNM2Q9BZ72 1349 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 KDM3AQ9Y4C1 1321 aa4.97□□□□□ -1.61
PABPC1-212ENST00000519622 PTPRFP10586 1907 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 BICDL2A1A5D9 508 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 LRRC53A6NM62 1247 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 FAM155AB1AL88 458 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MPHOSPH10O00566 681 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 PLA2G6O60733 806 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MYBP10242 640 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MYBL2P10244 700 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 RPA1P27694 616 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 SLC1A4P43007 532 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 VAV2P52735 878 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 ZNF131P52739 623 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MRPL12P52815 198 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 CHMP4BP1P59074 171 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 VSNL1P62760 191 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 GABPB1Q06547 395 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 TNK2Q07912 1038 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 PLCL1Q15111 1095 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 IFI16Q16666 785 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 WHAMMP3Q1A5X7 153 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 EDRF1Q3B7T1 1238 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 TEX35Q5T0J7 233 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 UNC5AQ6ZN44 842 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 C22orf34Q6ZV56 151 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 GPBP1Q86WP2 473 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 SFR1Q86XK3 245 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 CREG2Q8IUH2 290 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 TAB3Q8N5C8 712 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MSL3Q8N5Y2 521 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 SYT2Q8N9I0 419 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 OR6P1Q8NGX9 317 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 IL31RAQ8NI17 732 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 NETO1Q8TDF5 533 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 HNRNPLLQ8WVV9 542 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 FAM151AQ8WW52 585 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 CLEC4DQ8WXI8 215 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 ASIC4Q96FT7 647 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 CALML4Q96GE6 196 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MMS19Q96T76 1030 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 NAPGQ99747 312 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 HSD17B14Q9BPX1 270 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 REEP2Q9BRK0 252 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 POLR3CQ9BUI4 534 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 AMNQ9BXJ7 453 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 GTPBP4Q9BZE4 634 aaKnown RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 HAUS4Q9H6D7 363 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 SH2D4AQ9H788 454 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 ZNF408Q9H9D4 720 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 NHEJ1Q9H9Q4 299 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-212ENST00000519622 MLXIPQ9HAP2 919 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 FBXO28Q9NVF7 368 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 FAM86C1Q9NVL1 165 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 ADAMTS6Q9UKP5 1117 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 L1RE1Q9UN81 338 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 TRAF3IP3Q9Y228 551 aa4.96□□□□□ -1.62
PABPC1-212ENST00000519622 LUC7L2Q9Y383 392 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms