RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LNX1Q8TBB1 728 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 RLN3Q8WXF3 142 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 NAPBQ9H115 298 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 FAM105AQ9NUU6 356 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 ANAPC4Q9UJX5 808 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 BLACEA4D250 179 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 TNFRSF10BO14763 440 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CHADO15335 359 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 RNF113AO15541 343 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ATG7O95352 703 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 APBB3O95704 486 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CCNE2O96020 404 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 SLC3A2P08195 630 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 HNRNPLP14866 589 aaKnown RBP eCLIP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 GNAT2P19087 354 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 RHDQ02161 417 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 FCHO2Q0JRZ9 810 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 NFATC3Q12968 1075 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 DRP2Q13474 957 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 SMAD1Q15797 465 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 USP41Q3LFD5 358 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 UBXN11Q5T124 520 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ARHGAP40Q5TG30 622 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 VPS53Q5VIR6 699 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ZSCAN25Q6NSZ9 544 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 MRPL10Q7Z7H8 261 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CCDC60Q8IWA6 550 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 METTL13Q8N6R0 699 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 GIMAP8Q8ND71 665 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 OLIG1Q8TAK6 271 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 CSGALNACT1Q8TDX6 532 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 DEPDC1BQ8WUY9 529 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 TSC1Q92574 1164 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 MSANTD3Q96H12 275 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 TMEM209Q96SK2 561 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 PAAF1Q9BRP4 392 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ZKSCAN3Q9BRR0 538 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 AZI2Q9H6S1 392 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 SLC6A14Q9UN76 642 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 UBIAD1Q9Y5Z9 338 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ICE1Q9Y2F5 2266 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 ZMYM6O95789 1325 aa7.69□□□□□ -1.18
CTNNA1-216ENST00000519489 NBASA2RRP1 2371 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 HBP1O60381 514 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 U2AF2P26368 475 aaKnown RBP eCLIP7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 SLFN5Q08AF3 891 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 ITGB3BPQ13352 177 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 NNTQ13423 1086 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 DMC1Q14565 340 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 CEP85Q6P2H3 762 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 USP17L6PQ6QN14 398 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 RASSF3Q86WH2 238 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 GPR65Q8IYL9 337 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 ZSCAN18Q8TBC5 510 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 ARHGAP45Q92619 1136 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 GPRASP2Q96D09 838 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 APOL6Q9BWW8 343 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 JPH1Q9HDC5 661 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 DACT1Q9NYF0 836 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 PCDHB2Q9Y5E7 798 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 CELSR1Q9NYQ6 3014 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 PDZD2O15018 2839 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 ADAMTS9Q9P2N4 1935 aa7.68□□□□□ -1.18
CTNNA1-216ENST00000519489 DHX16O60231 1041 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 AFPP02771 609 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 ITGB2P05107 769 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SERPINF2P08697 491 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 IFIT2P09913 472 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 HLA-EP13747 358 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 GFPT1Q06210 699 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 ZNF484Q5JVG2 852 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 TWF2Q6IBS0 349 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 ABHD15Q6UXT9 468 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SYT13Q7L8C5 426 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 NLRX1Q86UT6 975 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 ERICH1Q86X53 443 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 DEFB119Q8N690 84 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SAMD3Q8N6K7 520 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 KBTBD3Q8NAB2 608 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 RPLP0P6Q8NHW5 317 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 NANOS1Q8WY41 292 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 RSPH1Q8WYR4 309 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 CDK15Q96Q40 435 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 LPIN3Q9BQK8 851 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 CORO1BQ9BR76 489 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 RSAD1Q9HA92 442 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 PRDM16Q9HAZ2 1276 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 IL21RQ9HBE5 538 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms