RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SNX27Q96L92 541 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 ACAP3Q96P50 834 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TCF25Q9BQ70 676 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 PAAF1Q9BRP4 392 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TMEM175Q9BSA9 504 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 MSTO1Q9BUK6 570 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 NUP58Q9BVL2 599 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 VN1R3Q9BXE9 311 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TOPORSQ9NS56 1045 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 MARCH5Q9NX47 278 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 THEGQ9P2T0 379 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 PUF60Q9UHX1 559 aaKnown RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 FAN1Q9Y2M0 1017 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 STYXL1Q9Y6J8 313 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 A0A0B4J269 797 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SMIM28A0A1B0GU29 152 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 GTPBP10A4D1E9 387 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 HIDE1A8MVS5 230 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 KCNJ18B7U540 433 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 RIOK3O14730 519 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 FSCN2O14926 492 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 PER2O15055 1255 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 OGTO15294 1046 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 LDHAP00338 332 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ALDH2P05091 517 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 THP07101 528 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 GARTP22102 1010 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 IGFBP6P24592 240 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 NRIP1P48552 1158 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SOX4Q06945 474 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 HYAL1Q12794 435 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 TUSC3Q13454 348 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 KCNJ12Q14500 433 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 NAB2Q15742 525 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SPECC1LQ69YQ0 1117 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ASTLQ6HA08 431 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 VSTM4Q8IW00 320 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SMYD4Q8IYR2 804 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SYCP3Q8IZU3 236 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ZSWIM2Q8NEG5 633 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 POMGNT1Q8WZA1 660 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 B3GALT6Q96L58 329 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 PPP1R10Q96QC0 940 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ERGIC2Q96RQ1 377 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 ZBP1Q9H171 429 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 TLE6Q9H808 572 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 UBE2ZQ9H832 354 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 SAMSN1Q9NSI8 373 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 CLDND1Q9NY35 253 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 IFNKQ9P0W0 207 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 CTNND2Q9UQB3 1225 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 LZTS1Q9Y250 596 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 MTCL1Q9Y4B5 1905 aaKnown RBP8.22□□□□□ -1.09
SDCBP-206ENST00000519115 NCOR1O75376 2440 aa8.22□□□□□ -1.09
SDCBP-206ENST00000519115 C2orf16Q68DN1 1984 aa8.21□□□□□ -1.09
SDCBP-206ENST00000519115 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 LGALS16A8MUM7 142 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 C2CD2LO14523 706 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 P4HA2O15460 535 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 LINC01565O15544 149 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TGFB1I1O43294 461 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 AP5Z1O43299 807 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 NRDCO43847 1150 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 FAM189A1O60320 539 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TBX10O75333 385 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 KIF4AO95239 1232 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 CLTAP09496 248 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 ATP1A3P13637 1013 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 KCNA5P22460 613 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 ADSSP30520 456 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 HOXD13P35453 343 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 PSMC2P35998 433 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 PBX1P40424 430 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 ACOT2P49753 483 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 PMS1P54277 932 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 RBM10P98175 930 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 KRT31Q15323 416 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 ENOX2Q16206 610 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 MAN2A1Q16706 1144 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 KYAT1Q16773 422 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 FUT10Q6P4F1 479 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TAS1R1Q7RTX1 841 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 DDX53Q86TM3 631 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 FMNL3Q8IVF7 1028 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TRIM59Q8IWR1 403 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 NELFCDQ8IXH7 590 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 HLA-CQ95604 372 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 PPP2R3CQ969Q6 453 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 C18orf25Q96B23 403 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms