RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 SEC24AO95486 1093 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 U2AF2P26368 475 aaKnown RBP eCLIP14.95□□□□□ -0.021e-7■■□□□ 12.8
VDAC3-204ENST00000519072 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
VDAC3-204ENST00000519072 ARPP19P56211 112 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 CSTF1Q05048 431 aaKnown RBP14.95□□□□□ -0.02
VDAC3-204ENST00000519072 PUM1Q14671 1186 aaKnown RBP eCLIP14.95□□□□□ -0.02
VDAC3-204ENST00000519072 KRT79Q5XKE5 535 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 RINT1Q6NUQ1 792 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 ZNF852Q6ZMS4 543 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 DGLUCYQ7Z3D6 616 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 FAM184AQ8NB25 1140 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 ZBTB44Q8NCP5 570 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 NELL1Q92832 810 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 C18orf25Q96B23 403 aaPredicted RBP14.95□□□□□ -0.02
VDAC3-204ENST00000519072 TCEAL4Q96EI5 215 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 SUSD3Q96L08 255 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 ZSCAN31Q96LW9 406 aaPredicted RBP14.95□□□□□ -0.02
VDAC3-204ENST00000519072 CORO1BQ9BR76 489 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 RUSC1Q9BVN2 902 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 HEBP1Q9NRV9 189 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
VDAC3-204ENST00000519072 PP2D1A8MPX8 630 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 LAD1O00515 517 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 MEFVO15553 781 aaPredicted RBP14.94□□□□□ -0.02
VDAC3-204ENST00000519072 LILRB5O75023 590 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 SEC24BO95487 1268 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 PRPHP41219 470 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 FZD5Q13467 585 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 CTXN3Q4LDR2 81 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 FAM78AQ5JUQ0 283 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 ZNF280DQ6N043 979 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 PDZD4Q76G19 769 aaPredicted RBP14.94□□□□□ -0.02
VDAC3-204ENST00000519072 ATRIPQ8WXE1 791 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 NTPCRQ9BSD7 190 aaKnown RBP14.94□□□□□ -0.02
VDAC3-204ENST00000519072 TIPINQ9BVW5 301 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 ZFP14Q9HCL3 533 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 PRMT8Q9NR22 394 aaPredicted RBP14.94□□□□□ -0.02
VDAC3-204ENST00000519072 SH2B1Q9NRF2 756 aaPredicted RBP14.94□□□□□ -0.02
VDAC3-204ENST00000519072 ZSCAN32Q9NX65 697 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 DLL3Q9NYJ7 618 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 MAFFQ9ULX9 164 aa14.94□□□□□ -0.02
VDAC3-204ENST00000519072 MED19A0JLT2 244 aaPredicted RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 MAN2B1O00754 1011 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 SLC16A4O15374 487 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 TOM1L1O75674 476 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 HARSP12081 509 aaKnown RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 GUCY2CP25092 1073 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 MCM4P33991 863 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 CCR2P41597 374 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 STRN3Q13033 797 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 GRM2Q14416 872 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 NOLC1Q14978 699 aaKnown RBP eCLIP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 IL17AQ16552 155 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 SLC10A6Q3KNW5 377 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 KCNK18Q7Z418 384 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 ZNF687Q8N1G0 1237 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 ELMOD1Q8N336 334 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 LEMD2Q8NC56 503 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 APPL2Q8NEU8 664 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 DDX12PQ92771 950 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 SMARCD2Q92925 531 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 IRF7Q92985 503 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 MS4A3Q96HJ5 214 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 ASB16Q96NS5 453 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 MMTAG2Q9BU76 263 aaKnown RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 TRMT61BQ9BVS5 477 aaKnown RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 BRD9Q9H8M2 597 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 PPP4R2Q9NY27 417 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 NCDNQ9UBB6 729 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 AFF4Q9UHB7 1163 aaKnown RBP14.93□□□□□ -0.02
VDAC3-204ENST00000519072 KCNG1Q9UIX4 513 aa14.93□□□□□ -0.02
VDAC3-204ENST00000519072 SFI1A8K8P3 1242 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 MOSPD3O75425 235 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 CDC25AP30304 524 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 EPHA5P54756 1037 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 IQCEQ6IPM2 695 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 DTHD1Q6ZMT9 781 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 MAP4K3Q8IVH8 894 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
VDAC3-204ENST00000519072 TMEM161BQ8NDZ6 487 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
VDAC3-204ENST00000519072 FAM126AQ9BYI3 521 aaPredicted RBP14.92□□□□□ -0.02
VDAC3-204ENST00000519072 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
VDAC3-204ENST00000519072 CEP72Q9P209 647 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 ANKFY1Q9P2R3 1169 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
VDAC3-204ENST00000519072 TPRP12270 2363 aaKnown RBP14.92□□□□□ -0.02
VDAC3-204ENST00000519072 EPG5Q9HCE0 2579 aa14.91□□□□□ -0.02
VDAC3-204ENST00000519072 M0QZQ0 153 aa14.91□□□□□ -0.02
VDAC3-204ENST00000519072 NRG2O14511 850 aaPredicted RBP14.91□□□□□ -0.02
VDAC3-204ENST00000519072 MAPTP10636 758 aaKnown RBP14.91□□□□□ -0.02
VDAC3-204ENST00000519072 PLS3P13797 630 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms