RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 CDK11BP21127 795 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 RPL9P32969 192 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 ALDH7A1P49419 539 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 WNT7BP56706 349 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 MCCD1P59942 119 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 DSC1Q08554 894 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 IQCB1Q15051 598 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 NAB2Q15742 525 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 DCAF17Q5H9S7 520 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 LMBRD2Q68DH5 695 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 DHX40Q8IX18 779 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 EFCAB13Q8IY85 973 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 COLGALT2Q8IYK4 626 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 ANKRD20A12PQ8NF67 263 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 PLEKHO2Q8TD55 490 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 C18orf25Q96B23 403 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 POP1Q99575 1024 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 CBX8Q9HC52 389 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 FANCLQ9NW38 375 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 DPP3Q9NY33 737 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 PCDHB12Q9Y5F1 795 aa14.03□□□□□ -0.16
PABPC1-205ENST00000518196 MRPL42Q9Y6G3 142 aaKnown RBP14.03□□□□□ -0.16
PABPC1-205ENST00000518196 COL4A6Q14031 1691 aa14.02□□□□□ -0.16
PABPC1-205ENST00000518196 LCHNA4D1U4 455 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 CASTOR2A6NHX0 329 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 KCNJ18B7U540 433 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 PHACTR2O75167 634 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 CA3P07451 260 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 TPM2P07951 284 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 MYOGP15173 224 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 EEF1GP26641 437 aaKnown RBP14.02□□□□□ -0.17
PABPC1-205ENST00000518196 LRPAP1P30533 357 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 GTF2H1P32780 548 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 OR1G1P47890 313 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 BCAR1P56945 870 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 DLG4P78352 724 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 CLDN10P78369 228 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 KCNJ12Q14500 433 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 NCAPHQ15003 741 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 IRF2BP1Q8IU81 584 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 CLP1Q92989 425 aaKnown RBP14.02□□□□□ -0.17
PABPC1-205ENST00000518196 ZNF558Q96NG5 402 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 COLEC11Q9BWP8 271 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 NKX2-4Q9H2Z4 354 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 TUBGCP4Q9UGJ1 667 aa14.02□□□□□ -0.17
PABPC1-205ENST00000518196 YBX2Q9Y2T7 364 aaKnown RBP14.02□□□□□ -0.17
PABPC1-205ENST00000518196 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.02□□□□□ -0.17
PABPC1-205ENST00000518196 NLRC5Q86WI3 1866 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 LINC01553A4QN01 128 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 PODXLO00592 558 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 N4BP1O75113 896 aaKnown RBP14.01□□□□□ -0.17
PABPC1-205ENST00000518196 GALTP07902 379 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 RBP5P82980 135 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 SOX4Q06945 474 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-205ENST00000518196 BIRC3Q13489 604 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 HSP90AA4PQ58FG1 418 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 SWT1Q5T5J6 900 aaKnown RBP14.01□□□□□ -0.17
PABPC1-205ENST00000518196 CDKAL1Q5VV42 579 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 DCLRE1AQ6PJP8 1040 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 ADGRD1Q6QNK2 874 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 KCNT2Q6UVM3 1135 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 TRAPPC11Q7Z392 1133 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 TRIM59Q8IWR1 403 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 COLGALT1Q8NBJ5 622 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 OR5B17Q8NGF7 314 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 ZNF516Q92618 1163 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 TGS1Q96RS0 853 aaKnown RBP14.01□□□□□ -0.17
PABPC1-205ENST00000518196 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 MMRN2Q9H8L6 949 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 SLC28A3Q9HAS3 691 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 GOLGA2P5Q9HBQ8 144 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 ITGA11Q9UKX5 1188 aa14.01□□□□□ -0.17
PABPC1-205ENST00000518196 PTPRJQ12913 1337 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 NRP1O14786 923 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 AFPP02771 609 aaKnown RBP14□□□□□ -0.17
PABPC1-205ENST00000518196 C4BPAP04003 597 aaKnown RBP14□□□□□ -0.17
PABPC1-205ENST00000518196 KRT19P08727 400 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 PAX3P23760 479 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 CTNNB1P35222 781 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 PPM1AP35813 382 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 BMPR1AP36894 532 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 GCLMP48507 274 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 SLC11A1P49279 550 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 CLCNKBP51801 687 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 GUCY2FP51841 1108 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 CETN1Q12798 172 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 TRPC3Q13507 836 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 MAN2A1Q16706 1144 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 UPP1Q16831 310 aa14□□□□□ -0.17
PABPC1-205ENST00000518196 C1orf220Q5T0J3 134 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms