RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PRKAR2BP31323 418 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 MAN1A1P33908 653 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PPARGP37231 505 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PIK3CAP42336 1068 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PTDSS1P48651 473 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RAD23BP54727 409 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 OLR1P78380 273 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 IRX4P78413 519 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PLOD1Q02809 727 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RIPPLY1Q0D2K3 151 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 AIMP1Q12904 312 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 E2F2Q14209 437 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 HLTFQ14527 1009 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 P3H1Q32P28 736 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 C4orf46Q504U0 113 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 NDUFAF5Q5TEU4 345 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RNF220Q5VTB9 566 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TOGARAM2Q6ZUX3 1019 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMTC3Q6ZXV5 915 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 FRA10AC1Q70Z53 315 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 MARK2Q7KZI7 788 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 CYFIP1Q7L576 1253 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 MIER3Q7Z3K6 550 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 WAPLQ7Z5K2 1190 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PIGWQ7Z7B1 504 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PATL1Q86TB9 770 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMEM139Q8IV31 216 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZBED8Q8IZ13 594 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SPICE1Q8N0Z3 855 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 BBS5Q8N3I7 341 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 DCLK2Q8N568 766 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ALLCQ8N6M5 410 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARL6IP6Q8N6S5 226 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TERB1Q8NA31 727 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PLEKHO2Q8TD55 490 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 CALML6Q8TD86 181 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCNG4Q8TDN1 519 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ANKRD49Q8WVL7 239 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RASSF5Q8WWW0 418 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 STARD8Q92502 1023 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 MRPS27Q92552 414 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 INPP5DQ92835 1189 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SYTL4Q96C24 671 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SDCCAG3Q96C92 435 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 LIN37Q96GY3 246 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 COG3Q96JB2 828 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 COX4I2Q96KJ9 171 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 NSMCE3Q96MG7 304 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 XPO6Q96QU8 1125 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TESK2Q96S53 571 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 LLPHQ9BRT6 129 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 FOXQ1Q9C009 403 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TPK1Q9H3S4 243 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 CAAP1Q9H8G2 361 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 FBRSQ9HAH7 460 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 C12orf10Q9HB07 376 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PLGRKTQ9HBL7 147 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 MOV10Q9HCE1 1003 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 DIABLOQ9NR28 239 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SEMA3GQ9NS98 782 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARMC1Q9NVT9 282 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 GIN1Q9NXP7 522 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 CCPG1Q9ULG6 757 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAF1Q9UNN5 650 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 AGAP1Q9UPQ3 857 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRAF3IP3Q9Y228 551 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 APOBEC2Q9Y235 224 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SCINQ9Y6U3 715 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 AFF2P51816 1311 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PASKQ96RG2 1323 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 CEMIPQ8WUJ3 1361 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 EIF4G3O43432 1585 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 A0A088AWK7 358 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SH3PXD2BA1X283 911 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 FADS2P1A8MWK0 482 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMEM114B3SHH9 223 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAM47E-STBD1D6RA91 191 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHL1O00533 1208 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 XPOTO43592 962 aaKnown RBP5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ECE2O60344 883 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SERPINB7O75635 380 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 B3GALNT1O75752 331 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 LRIG2O94898 1065 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZBED1O96006 694 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 GSTT2P0CG29 244 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 GSTT2BP0CG30 244 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 VAV1P15498 845 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 IL4RP24394 825 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMOD1P28289 359 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SERPINB3P29508 390 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 GRK4P32298 578 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 CDK7P50613 346 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 SEC24CP53992 1094 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 PDE1AP54750 535 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 AK2P54819 239 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 XIAPP98170 497 aa5.11□□□□□ -1.59
HMGB1P19-201ENST00000517578 AMPD2Q01433 879 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms