RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 KLF1Q13351 362 aaPredicted RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 RNF220Q5VTB9 566 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 APOBEC3HQ6NTF7 200 aaKnown RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 PHC3Q8NDX5 983 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 DCTN4Q9UJW0 460 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 ATRNL1Q5VV63 1379 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 WDR91A4D1P6 747 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 ACADSP16219 412 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 SP100P23497 879 aaPredicted RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 MFAP3P55082 362 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 KLC1Q07866 573 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 WASHC2DQ5SRD0 308 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 GSTA5Q7RTV2 222 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 EGFL6Q8IUX8 553 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
PCM1-203ENST00000517545 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
PCM1-203ENST00000517545 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 MUTP22033 750 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 ADSSP30520 456 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 OVGP1Q12889 678 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 SPIRE2Q8WWL2 714 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 GREB1LQ9C091 1923 aaPredicted RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 PRPF4O43172 522 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCM1-203ENST00000517545 KRT5P13647 590 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 ETS1P14921 441 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 KLRC2P26717 231 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 RAB27AP51159 221 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 TSNAXIP1Q2TAA8 658 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 RBBP8NLQ8NC74 664 aaPredicted RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 NRG4Q8WWG1 115 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 SMC6Q96SB8 1091 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 CD58P19256 250 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 MARK3P27448 753 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 PTPN4P29074 926 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 TAS2R40P59535 323 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 JAG1P78504 1218 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 MYBPC2Q14324 1141 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 MAPK6Q16659 721 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 C4orf50Q6ZRC1 276 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 RELL1Q8IUW5 271 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 CEP120Q8N960 986 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 MAK16Q9BXY0 300 aaKnown RBP13.11□□□□□ -0.31
PCM1-203ENST00000517545 CYLDQ9NQC7 956 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 KANSL3Q9P2N6 904 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCM1-203ENST00000517545 C2CD2Q9Y426 696 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
PCM1-203ENST00000517545 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 TRAFD1O14545 582 aaPredicted RBP13.1□□□□□ -0.31
PCM1-203ENST00000517545 NVLO15381 856 aaKnown RBP13.1□□□□□ -0.31
PCM1-203ENST00000517545 BANF1O75531 89 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 KRT36O76013 467 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 PLS3P13797 630 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 RBBP5Q15291 538 aaKnown RBP13.1□□□□□ -0.31
PCM1-203ENST00000517545 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 RFWD2Q8NHY2 731 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
PCM1-203ENST00000517545 PRR11Q96HE9 360 aaPredicted RBP13.1□□□□□ -0.31
PCM1-203ENST00000517545 CFAP57Q96MR6 1250 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 ASB3Q9Y575 518 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 NPTXRO95502 500 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 ABHD2P08910 425 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 RASSF2P50749 326 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 RCN1Q15293 331 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 VPS72Q15906 364 aa13.1□□□□□ -0.31
PCM1-203ENST00000517545 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms