RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 WNT3P56703 355 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 GNAI1P63096 354 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 POU6F2P78424 691 aaPredicted RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 PTH1RQ03431 593 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 PPFIA1Q13136 1202 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 RAB32Q13637 225 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ARL13BQ3SXY8 428 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ZACNQ401N2 412 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CCDC38Q502W7 563 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 SLC44A4Q53GD3 710 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ZMYM1Q5SVZ6 1142 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 AFMIDQ63HM1 303 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 USP17L6PQ6QN14 398 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 MPZL3Q6UWV2 235 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 USP30Q70CQ3 517 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 DOK3Q7L591 496 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 STK32CQ86UX6 486 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 LIX1LQ8IVB5 337 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CMTM4Q8IZR5 234 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 FAM9AQ8IZU1 332 aaPredicted RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CCDC33Q8N5R6 958 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ZNF527Q8NB42 609 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 REPS2Q8NFH8 660 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 NLGN4YQ8NFZ3 816 aaPredicted RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 RABGGTAQ92696 567 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 MBD6Q96DN6 1003 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 SNX22Q96L94 193 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 SIGLEC10Q96LC7 697 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CDC5LQ99459 802 aaKnown RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 P2RX7Q99572 595 aaKnown RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 NDC1Q9BTX1 674 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 NSUN3Q9H649 340 aaKnown RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 L2HGDHQ9H9P8 463 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 NTMQ9P121 344 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 SRRDQ9UH36 339 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 SLC23A1Q9UHI7 598 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CPA4Q9UI42 421 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 CAPN11Q9UMQ6 739 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 PCDHA6Q9UN73 950 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 PCDHGB3Q9Y5G1 929 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 ACTL7AQ9Y615 435 aa4.01□□□□□ -1.77
RNU6-840P-201ENST00000517275 LRRC10BA6NIK2 292 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 M0R3H8 397 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 BTN3A1O00481 513 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 NPC1O15118 1278 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 ARHGAP6O43182 974 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 HAUS5O94927 633 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 ITGA5P08648 1049 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SNRPA1P09661 255 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 TXNP10599 105 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 DDIT3P35638 169 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SERPINF1P36955 418 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 MAPK10P53779 464 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 BPIFB4P59827 614 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 DLG4P78352 724 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 EXOSC9Q06265 439 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SLC13A2Q13183 592 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 MRPL49Q13405 166 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 EFR3AQ14156 821 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 MFSD14BQ5SR56 506 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 FKBP15Q5T1M5 1219 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 CIAPIN1Q6FI81 312 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 CCDC174Q6PII3 467 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 RFX8Q6ZV50 586 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 KRT28Q7Z3Y7 464 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 PPP1R32Q7Z5V6 425 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 ADGRE4PQ86SQ3 457 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SKAP1Q86WV1 359 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 KRT73Q86Y46 540 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 ANKRD18AQ8IVF6 992 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SDR16C5Q8N3Y7 309 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SH2D3CQ8N5H7 860 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 MYCT1Q8N699 235 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 VGLL2Q8N8G2 317 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 FBXO15Q8NCQ5 510 aaPredicted RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 CFHR4Q92496 578 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 CEP95Q96GE4 821 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 LIN37Q96GY3 246 aaPredicted RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 PPP1R16BQ96T49 567 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 C1orf43Q9BWL3 253 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 DHX36Q9H2U1 1008 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 LDAHQ9H6V9 325 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 PLEKHM1Q9Y4G2 1056 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 LRRFIP2Q9Y608 721 aaKnown RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 SLC4A7Q9Y6M7 1214 aa4□□□□□ -1.77
RNU6-840P-201ENST00000517275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4□□□□□ -1.77
RNU6-840P-201ENST00000517275 CXorf49A8MYA2 514 aaPredicted RBP3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 ACKR2O00590 384 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 NCAM2O15394 837 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 CCP110O43303 1012 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 DNAJB5O75953 348 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 AMHP03971 560 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 SBK3P0C264 359 aa3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 ZNF888P0CJ79 500 aaPredicted RBP3.99□□□□□ -1.77
RNU6-840P-201ENST00000517275 ALAS1P13196 640 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms