RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NLRP10Q86W26 655 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 GATAD2AQ86YP4 633 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARMC8Q8IUR7 673 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 UNC45BQ8IWX7 931 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCDC170Q8IYT3 715 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 SAMD14Q8IZD0 417 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 C17orf53Q8N3J3 647 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TTC39CQ8N584 583 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 SRBD1Q8N5C6 995 aaKnown RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMEM57Q8N5G2 664 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMCO5AQ8N6Q1 288 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF655Q8N720 491 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 C12orf50Q8NA57 414 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 DAGLBQ8NCG7 672 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR6B3Q8NGW1 331 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR6Y1Q8NGX8 325 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 JAKMIP2Q96AA8 810 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 NEIL1Q96FI4 390 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 FEM1CQ96JP0 617 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 GBP4Q96PP9 640 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRAPPC9Q96Q05 1148 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 NOL10Q9BSC4 688 aaKnown RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ITPAQ9BY32 194 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 C2orf40Q9H1Z8 148 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PABPC3Q9H361 631 aaKnown RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 EPB41L1Q9H4G0 881 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRDM13Q9H4Q3 707 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRPV4Q9HBA0 871 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMEM8AQ9HCN3 771 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 AP5S1Q9NUS5 200 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TDP1Q9NUW8 608 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADGRE2Q9UHX3 823 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 AGTPBP1Q9UPW5 1226 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 CLCA2Q9UQC9 943 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 COA3Q9Y2R0 106 aaPredicted RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 RRP15Q9Y3B9 282 aaKnown RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PSAT1Q9Y617 370 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 MYPNQ86TC9 1320 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PASKQ96RG2 1323 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 CNTNAP4Q9C0A0 1308 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 SSU72P8A0A1W2PR75 194 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCDC78A2IDD5 438 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM43BA6NCK2 446 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRAMEF25A6NGN4 478 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 NEURL1BA8MQ27 555 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 H3BNC9 293 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 BTN3A1O00481 513 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 FGF10O15520 208 aaPredicted RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 COBLO75128 1261 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SCGB1D1O95968 90 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PLATP00750 562 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 C4BPAP04003 597 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ANXA1P04083 346 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 TK1P04183 234 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATP5BP06576 529 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PFKMP08237 780 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SYPP08247 313 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 MMEP08473 750 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CELA3BP08861 270 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CSF1P09603 554 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADH6P28332 368 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 GABRB3P28472 473 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PEX19P40855 299 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CD86P42081 329 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CARSP49589 748 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 FLT3LGP49771 235 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCT4P50991 539 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CLCN2P51788 898 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC12A2P55011 1212 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 EVCP57679 992 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 NLRP5P59047 1200 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP3CAQ08209 521 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 GALNT2Q10471 571 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 STK4Q13043 487 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SNAPC2Q13487 334 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 MYBPC3Q14896 1274 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 TBCEQ15813 527 aaPredicted RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATF7IPQ6VMQ6 1270 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 GADL1Q6ZQY3 521 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 THAP5Q7Z6K1 395 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 GALNT7Q86SF2 657 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRPF39Q86UA1 669 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 RSPH3Q86UC2 560 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP1R3BQ86XI6 285 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 DIS3L2Q8IYB7 885 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 RTKN2Q8IZC4 609 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCDC155Q8N6L0 562 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 GLB1L3Q8NCI6 653 aaPredicted RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 LSM14AQ8ND56 463 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 HIPK4Q8NE63 616 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP1R14CQ8TAE6 165 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 BRIX1Q8TDN6 353 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 RSAD2Q8WXG1 361 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 TBC1D5Q92609 795 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP6NLQ92738 828 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM43Q96BQ3 446 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms