RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TUBGCP4Q9UGJ1 667 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ADAM28Q9UKQ2 775 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DSEQ9UL01 958 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SIP14410 1827 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LCHNA4D1U4 455 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CYB561D2O14569 222 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 P4HA2O15460 535 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FAM189A1O60320 539 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CSPG5O95196 566 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CXCL14O95715 111 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HLA-DRAP01903 254 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SRGAP2BP0DMP2 458 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 IGFBP4P22692 258 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRPAP1P30533 357 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PBX2P40425 430 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FMO5P49326 533 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GUCY2FP51841 1108 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ERVK-21P61565 698 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DLG4P78352 724 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TAP1Q03518 808 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 UBXN1Q04323 297 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 UBE3AQ05086 875 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SMC1AQ14683 1233 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 USP41Q3LFD5 358 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 WDR72Q3MJ13 1102 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FAM171A1Q5VUB5 890 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C9orf57Q5W0N0 161 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PDE12Q6L8Q7 609 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FUT10Q6P4F1 479 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GBP6Q6ZN66 633 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SV2AQ7L0J3 742 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LUZP1Q86V48 1076 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZC3H3Q8IXZ2 948 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EFCAB13Q8IY85 973 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 VPS52Q8N1B4 723 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SLC39A11Q8N1S5 342 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TTC39CQ8N584 583 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KLHL23Q8NBE8 558 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZSWIM2Q8NEG5 633 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 OR5B17Q8NGF7 314 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HASPINQ8TF76 798 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RABGGTAQ92696 567 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CLP1Q92989 425 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 IGSF21Q96ID5 467 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZMAT2Q96NC0 199 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NT5C1BQ96P26 610 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TTPALQ9BTX7 342 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LMAN2LQ9H0V9 348 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NDST4Q9H3R1 872 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF576Q9H609 170 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CWH43Q9H720 699 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MRPL17Q9NRX2 175 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RAB20Q9NX57 234 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TAB2Q9NYJ8 693 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NXF1Q9UBU9 619 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 YBX2Q9Y2T7 364 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SNX9Q9Y5X1 595 aa5.86□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DNAH12Q6ZR08 3092 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FSD2A1L4K1 749 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GOLGA6L6A8MZA4 724 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 H3BNC9 293 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMEM189-UBE2V1I3L0A0 370 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C2CD2LO14523 706 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SYN3O14994 580 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C4BPAP04003 597 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TBXAS1P24557 533 aaPredicted RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KLRC2P26717 231 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ELF1P32519 619 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PBX3P40426 434 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BRCC3P46736 316 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LHX1P48742 406 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GLUD2P49448 558 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 AFF1P51825 1210 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 COPB1P53618 953 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MFAP3P55082 362 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MARSP56192 900 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ARPP19P56211 112 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 UBASH3AP57075 661 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LILRA4P59901 499 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MYL6P60660 151 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TSPY1Q01534 308 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PLCB3Q01970 1234 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DSC1Q08554 894 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRMPQ12912 555 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KRT31Q15323 416 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZBTB6Q15916 424 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 UPP1Q16831 310 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EXOC3L4Q17RC7 722 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TSR1Q2NL82 804 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZACNQ401N2 412 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CTXN3Q4LDR2 81 aa5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HABP4Q5JVS0 413 aaKnown RBP5.85□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CDKAL1Q5VV42 579 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms