RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DPF2Q92785 391 aa3.84□□□□□ -1.79
RNU6-1088P-201ENST00000516850 LRFN3Q9BTN0 628 aa3.84□□□□□ -1.79
RNU6-1088P-201ENST00000516850 SEMA4GQ9NTN9 838 aa3.84□□□□□ -1.79
RNU6-1088P-201ENST00000516850 SALL3Q9BXA9 1300 aa3.84□□□□□ -1.79
RNU6-1088P-201ENST00000516850 RPLP2P05387 115 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 VIL1P09327 827 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FOLR3P41439 243 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ERVK-21P61565 698 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 RPS7P62081 194 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ACAP2Q15057 778 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GEN1Q17RS7 908 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PREPLQ4J6C6 727 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PABPC1LQ4VXU2 614 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 DACT2Q5SW24 774 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 UTP14CQ5TAP6 766 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PPP4R3AQ6IN85 833 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GRASPQ7Z6J2 395 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CLNKQ7Z7G1 428 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ZGPATQ8N5A5 531 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 OR2I1PQ8NGU4 316 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SSH3Q8TE77 659 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 HDAC10Q969S8 669 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TMX3Q96JJ7 454 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PUS7LQ9H0K6 701 aaKnown RBP3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PRDM13Q9H4Q3 707 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 INTS13Q9NVM9 706 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MKS1Q9NXB0 559 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SLC5A4Q9NY91 659 aa3.83□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PHLDB1Q86UU1 1377 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CCDC78A2IDD5 438 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TRIM75PA6NK02 468 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 K7ESF4 209 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 YY2O15391 372 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 AGFG2O95081 481 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ATP8B2P98198 1209 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SF3B3Q15393 1217 aaKnown RBP3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KAZNQ674X7 775 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GADL1Q6ZQY3 521 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CNTD1Q8N815 330 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TMEM125Q96AQ2 219 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FBXL20Q96IG2 436 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PDLIM2Q96JY6 352 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PACSIN1Q9BY11 444 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MAN1C1Q9NR34 630 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ZNF277Q9NRM2 450 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 HSFX1Q9UBD0 423 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PCDHA13Q9Y5I0 950 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MRFAP1Q9Y605 127 aa3.82□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PRAMEF33A0A0G2JMD5 474 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 A0A1W2PS29 197 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KLHL33A6NCF5 533 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TOR1BO14657 336 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GRM6O15303 877 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MPPED1O15442 326 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PRAMEF10O60809 474 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NDUFS2O75306 463 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PROP1O75360 226 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FCER1AP12319 257 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KCNA2P16389 499 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 WASP42768 502 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CDC42EP1Q00587 391 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PIGFQ07326 219 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SLFN5Q08AF3 891 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NBPF8Q3BBV2 869 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 COLEC12Q5KU26 742 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ZNF362Q5T0B9 420 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FAM98AQ8NCA5 519 aaKnown RBP3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 TOR1AIP2Q8NFQ8 470 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 KLK15Q9H2R5 256 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CDYLQ9Y232 598 aa3.81□□□□□ -1.8
RNU6-1088P-201ENST00000516850 XPOTO43592 962 aaKnown RBP3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SGTAO43765 313 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ZFPL1O95159 310 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SRGNP10124 158 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NHLH1Q02575 133 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 RAB39AQ14964 217 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 FAM153CQ494X1 144 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CD300EQ496F6 205 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 VWA1Q6PCB0 445 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 NECAB2Q7Z6G3 386 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 IL17RDQ8NFM7 739 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SNX19Q92543 992 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 PGBD1Q96JS3 809 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 UROC1Q96N76 676 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 SPC25Q9HBM1 224 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CPNE5Q9HCH3 593 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ASB6Q9NWX5 421 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 JKAMPQ9P055 326 aa3.8□□□□□ -1.8
RNU6-1088P-201ENST00000516850 CCDC195A0A1B0GUA6 201 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MGST3O14880 152 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 MATN4O95460 622 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GPD1P21695 349 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 GRIA3P42263 894 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 ATXN1P54253 815 aaKnown RBP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 DYRK1AQ13627 763 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 DDX42Q86XP3 938 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 DCBLD1Q8N8Z6 715 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 Q8NA96 180 aa3.79□□□□□ -1.8
RNU6-1088P-201ENST00000516850 B3GALNT2Q8NCR0 500 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms