RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RTN3O95197 1032 aaPredicted RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 URODP06132 367 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 KRT19P08727 400 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 IFIT2P09913 472 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 GNAT1P11488 350 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 PLCG2P16885 1265 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC6A11P48066 632 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 GSTO1P78417 241 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 PDE4DQ08499 809 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SFSWAPQ12872 951 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 BYSLQ13895 437 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CEBPEQ15744 281 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 TMEM266Q2M3C6 531 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 VWA2Q5GFL6 755 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 MANEAQ5SRI9 462 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CCDC62Q6P9F0 684 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 VASH2Q86V25 355 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 GLYCTKQ8IVS8 523 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CCDC146Q8IYE0 955 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 NXPE1Q8N323 547 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 PRPF38AQ8NAV1 312 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 GMCL1P1Q8NEA9 526 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 ADAMTS18Q8TE60 1221 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CHTF18Q8WVB6 975 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 ATP2A3Q93084 1043 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 NSUN4Q96CB9 384 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 RPS6KC1Q96S38 1066 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SYT3Q9BQG1 590 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 MYH16Q9H6N6 1097 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SH2D4AQ9H788 454 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC38A10Q9HBR0 1119 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 ARHGEF10LQ9HCE6 1279 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CHST11Q9NPF2 352 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SEMA3GQ9NS98 782 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 C1orf112Q9NSG2 853 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 GNL3LQ9NVN8 582 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SCHIP1Q9P0W5 487 aaPredicted RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 ADD3Q9UEY8 706 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 KLF2Q9Y5W3 355 aaPredicted RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 SHANK1Q9Y566 2161 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 PTPRDP23468 1912 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 CEP192Q8TEP8 1941 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 LOC102724159A0A0B4J2E5 919 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 A0A1B0GTW7 788 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 A0A1W2PNU3 283 aaPredicted RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 FIGNL2A6NMB9 653 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 HEPACAM2A8MVW5 462 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 MEI4A8MW99 385 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 K7EM74 188 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 KCNN4O15554 427 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 CYP26A1O43174 497 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PCDHGA12O60330 932 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 XYLBO75191 536 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 NEFLP07196 543 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 CT47B1P0C2W7 299 aaPredicted RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 CFPP27918 469 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 OAZ1P54368 228 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PER3P56645 1201 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 MRPS6P82932 125 aaKnown RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 IL9RQ01113 521 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PSMD2Q13200 908 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ILKQ13418 452 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ART3Q13508 389 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PWP2Q15269 919 aaKnown RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 NR6A1Q15406 480 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PPM1LQ5SGD2 360 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 LILRA6Q6PI73 481 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC36A4Q6YBV0 504 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ERICH6Q7L0X2 663 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PARS2Q7L3T8 475 aaKnown RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 CLEC14AQ86T13 490 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 RSPH3Q86UC2 560 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 FAM9BQ8IZU0 186 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ZCCHC9Q8N567 271 aaKnown RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 WFDC11Q8NEX6 87 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 SGMS2Q8NHU3 365 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PPTC7Q8NI37 304 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 LPIN2Q92539 896 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 NRGNQ92686 78 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 SMARCD2Q92925 531 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PRR11Q96HE9 360 aaPredicted RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 FUBP3Q96I24 572 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 TRERF1Q96PN7 1200 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 C16orf70Q9BSU1 422 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ADAM19Q9H013 955 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ELAC1Q9H777 363 aaKnown RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 ZNF395Q9H8N7 513 aaPredicted RBP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 SNTG2Q9NY99 539 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 FAN1Q9Y2M0 1017 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 SQORQ9Y6N5 450 aa3.72□□□□□ -1.81
SCARNA13-201ENST00000516672 PKDREJQ9NTG1 2253 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 H3BRB1 525 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 LRRTM2O43300 516 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 CSO75390 466 aaKnown RBP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 ALDH1A2O94788 518 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 GALTP07902 379 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 FDX1P10109 184 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 CCT8P50990 548 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms