RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 LMBRD2Q68DH5 695 aaPredicted RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 CDCA2Q69YH5 1023 aaPredicted RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 PLEKHA7Q6IQ23 1121 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 TMEM270Q6UE05 265 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 GADL1Q6ZQY3 521 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 TRMT10CQ7L0Y3 403 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 PLPPR4Q7Z2D5 763 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 PRPF31Q8WWY3 499 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 DCPSQ96C86 337 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 TLCD1Q96CP7 247 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 CYFIP2Q96F07 1278 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 APOBEC3GQ9HC16 384 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 ADARB2Q9NS39 739 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 PARVAQ9NVD7 372 aa15.83■□□□□ 0.12
NUP54-217ENST00000514987 BCCIPQ9P287 314 aaKnown RBP eCLIP15.83■□□□□ 0.12
NUP54-217ENST00000514987 NOVA2Q9UNW9 492 aaKnown RBP15.83■□□□□ 0.12
NUP54-217ENST00000514987 PTPRJQ12913 1337 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 A0A0G2JLL6 359 aaPredicted RBP15.82■□□□□ 0.12
NUP54-217ENST00000514987 FAM170AA1A519 330 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 OGTO15294 1046 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 THAP12O43422 761 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 CALB1P05937 261 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 PAEPP09466 180 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
NUP54-217ENST00000514987 TAP1Q03518 808 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 FSTL1Q12841 308 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 PRKG1Q13976 671 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 MAPK6Q16659 721 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 TTC19Q6DKK2 380 aaPredicted RBP15.82■□□□□ 0.12
NUP54-217ENST00000514987 PRRT2Q7Z6L0 340 aaPredicted RBP15.82■□□□□ 0.12
NUP54-217ENST00000514987 SULF1Q8IWU6 871 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 KATNAL2Q8IYT4 538 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 BBOF1Q8ND07 529 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 CENPTQ96BT3 561 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 ZNF518BQ9C0D4 1074 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 CCDC113Q9H0I3 377 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 SLC12A6Q9UHW9 1150 aa15.82■□□□□ 0.12
NUP54-217ENST00000514987 LRRC37A2A6NM11 1700 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 TCRBV7S2A1N4TA0A589 114 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 MSCO60682 206 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 FAM107AO95990 144 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ASS1P00966 412 aaKnown RBP15.81■□□□□ 0.12
NUP54-217ENST00000514987 MAGEA9P43362 315 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ZNF132P52740 706 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 WNT7BP56706 349 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 YWHAEP62258 255 aaKnown RBP15.81■□□□□ 0.12
NUP54-217ENST00000514987 MCL1Q07820 350 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 PTK6Q13882 451 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 TFDP1Q14186 410 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 DUOXA2Q1HG44 320 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 SGSM1Q2NKQ1 1148 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 SPOPLQ6IQ16 392 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 CEP128Q6ZU80 1094 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ARMC9Q7Z3E5 817 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ERO1BQ86YB8 467 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 UBR7Q8N806 425 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ATL2Q8NHH9 583 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 EXD1Q8NHP7 514 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 DDX27Q96GQ7 796 aaKnown RBP15.81■□□□□ 0.12
NUP54-217ENST00000514987 TCHPQ9BT92 498 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ROPN1BQ9BZX4 212 aaPredicted RBP15.81■□□□□ 0.12
NUP54-217ENST00000514987 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 ROPN1Q9HAT0 212 aaPredicted RBP15.81■□□□□ 0.12
NUP54-217ENST00000514987 IP6K2Q9UHH9 426 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 NUB1Q9Y5A7 615 aa15.81■□□□□ 0.12
NUP54-217ENST00000514987 IGKV6-21A0A0C4DH24 114 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 MAGOHP61326 146 aaKnown RBP15.8■□□□□ 0.12
NUP54-217ENST00000514987 LMNB2Q03252 620 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 LAMTOR4Q0VGL1 99 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 MAMLD1Q13495 774 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 CELF3Q5SZQ8 465 aaKnown RBP15.8■□□□□ 0.12
NUP54-217ENST00000514987 NLRP14Q86W24 1093 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 OR5B17Q8NGF7 314 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 FEZF2Q8TBJ5 459 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 SNF8Q96H20 258 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 FAXDC2Q96IV6 333 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 GPR20Q99678 358 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 ACO2Q99798 780 aaKnown RBP15.8■□□□□ 0.12
NUP54-217ENST00000514987 EPB41L4BQ9H329 900 aa15.8■□□□□ 0.12
NUP54-217ENST00000514987 POLR2AP24928 1970 aaKnown RBP15.8■□□□□ 0.12
NUP54-217ENST00000514987 A0A087WUV0 522 aaPredicted RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 GMNCA6NCL1 334 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 ASAP2O43150 1006 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 AGTP01019 485 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 PRKCBP05771 671 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 MMP8P22894 467 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 KRT17Q04695 432 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 CCNG2Q16589 344 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ZBTB41Q5SVQ8 909 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 TMEM35BQ8NCS4 154 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 MYCBPAPQ8TBZ2 947 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 ZNF606Q8WXB4 792 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 PPM1EQ8WY54 764 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
NUP54-217ENST00000514987 ELMO3Q96BJ8 720 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 CCT8L2Q96SF2 557 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 C11orf70Q9BRQ4 267 aa15.79■□□□□ 0.12
NUP54-217ENST00000514987 DCLK3Q9C098 648 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms