RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 DNAJC19Q96DA6 116 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 STRA6Q9BX79 667 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 SEL1LQ9UBV2 794 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 FBXL5Q9UKA1 691 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 CITO14578 2027 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 TISP43B9A030 160 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 ANKRD63C9JTQ0 380 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 XPOTO43592 962 aaKnown RBP11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 ATF2P15336 505 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 CTXN3Q4LDR2 81 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 SPATA1Q5VX52 437 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 JADE1Q6IE81 842 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 CCDC73Q6ZRK6 1079 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 TCEAL8Q8IYN2 117 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 SLC44A3Q8N4M1 653 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 OLFML3Q9NRN5 406 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 DNMT3BQ9UBC3 853 aaKnown RBP11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 CDH7Q9ULB5 785 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 DERAQ9Y315 318 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 TRIP11Q15643 1979 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 TSC2P49815 1807 aa11.37□□□□□ -0.59
HMGXB3-205ENST00000514469 PPEF2O14830 753 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 NFICP08651 508 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 SRFP11831 508 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 NPR3P17342 541 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 GAP43P17677 238 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 STAT6P42226 847 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 GUCY2FP51841 1108 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 PABPC1LQ4VXU2 614 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 SLFN12LQ6IEE8 588 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 BEST2Q8NFU1 509 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 ITFG1Q8TB96 612 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 FGF13Q92913 245 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 MFSD1Q9H3U5 465 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 AVENQ9NQS1 362 aaPredicted RBP11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 AGO2Q9UKV8 859 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 MAFFQ9ULX9 164 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 POLIQ9UNA4 740 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 DMDP11532 3685 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 MYO15AQ9UKN7 3530 aa11.36□□□□□ -0.59
HMGXB3-205ENST00000514469 USP34Q70CQ2 3546 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 SPTLC2O15270 562 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 PPP6R2O75170 966 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 OAZ2O95190 189 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 SEC24AO95486 1093 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 YEATS4O95619 227 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 LRG1P02750 347 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 RHOP08100 348 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 CFHP08603 1231 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 TYMPP19971 482 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ADSSP30520 456 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ACOT2P49753 483 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 CLCN5P51795 746 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 CASP5P51878 434 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ARPP19P56211 112 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 KCNA1Q09470 495 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 STK38Q15208 465 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 E2F4Q16254 413 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 SLC5A9Q2M3M2 681 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 CRELD2Q6UXH1 353 aaPredicted RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 MTSS1LQ765P7 747 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 NPAS3Q8IXF0 933 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 SIX5Q8N196 739 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 FGF14Q92915 247 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ZNF396Q96N95 335 aaPredicted RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 FGFBP2Q9BYJ0 223 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ASB7Q9H672 318 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 CYP4F11Q9HBI6 524 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 AFF4Q9UHB7 1163 aaKnown RBP11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 INSL5Q9Y5Q6 135 aa11.35□□□□□ -0.59
HMGXB3-205ENST00000514469 ANO9A1A5B4 782 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PIRO00625 290 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms