RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ZC3H10	Q96K80	434 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	B3GNT5	Q9BYG0	378 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	REXO4	Q9GZR2	422 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MMRN2	Q9H8L6	949 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RBM12	Q9NTZ6	932 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ING3	Q9NXR8	418 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TRPS1	Q9UHF7	1281 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	EVL	Q9UI08	416 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	EIF2B4	Q9UI10	523 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DMTF1	Q9Y222	760 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RPTOR	Q8N122	1335 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		A0A088AWK7	358 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PLSCR1	O15162	318 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PJA2	O43164	708 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TEX33	O43247	280 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RAMP2	O60895	175 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPFIA2	O75334	1257 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ARIH2	O95376	493 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GSPT1	P15170	499 aa	Known RBP	4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PEX2	P28328	305 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FXR1	P51114	621 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	POLD3	Q15054	466 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PTPA	Q15257	358 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LLGL1	Q15334	1064 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LONRF1	Q17RB8	773 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RNF220	Q5VTB9	566 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ERAP2	Q6P179	960 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DAAM2	Q86T65	1068 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DEPTOR	Q8TB45	409 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LRTOMT	Q8WZ04	291 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CHFR	Q96EP1	664 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM167A	Q96KS9	214 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CCDC138	Q96M89	665 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CGRRF1	Q99675	332 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HERPUD2	Q9BSE4	406 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LRFN3	Q9BTN0	628 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	BTBD1	Q9H0C5	482 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KCNH6	Q9H252	994 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NRDE2	Q9H7Z3	1164 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PTPRH	Q9HD43	1115 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	POLH	Q9Y253	713 aa		4.22	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		A0A087X1B8	175 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RASA4B	C9J798	803 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RNASET2	O00584	256 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RASA4	O43374	803 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ENDOD1	O94919	500 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ABHD16A	O95870	558 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FGA	P02671	866 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYB	P10242	640 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LAG3	P18627	525 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CASR	P41180	1078 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	AVPR1B	P47901	424 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FLT3LG	P49771	235 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CCT2	P78371	535 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	APBA1	Q02410	837 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DSC2	Q02487	901 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PPP3CA	Q08209	521 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	UBE3C	Q15386	1083 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CNN3	Q15417	329 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SMN1	Q16637	294 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C3orf36	Q3SXR2	165 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TIGD2	Q4W5G0	525 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	EFCAB12	Q6NXP0	572 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	KCNV1	Q6PIU1	500 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C1orf228	Q6PIY5	440 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MAEA	Q7L5Y9	396 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	KLHDC4	Q8TBB5	520 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NSUN6	Q8TEA1	469 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PNISR	Q8TF01	805 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RGMA	Q96B86	450 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MTFMT	Q96DP5	389 aa	Known RBP	4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SGCZ	Q96LD1	299 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C7orf25	Q9BPX7	421 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NDC1	Q9BTX1	674 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	BHMT2	Q9H2M3	363 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GPRC5D	Q9NZD1	345 aa		4.21	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CCDC189	A1A4V9	331 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ITGA10	O75578	1167 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SCAF4	O95104	1147 aa	Known RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FTL	P02792	175 aa	Predicted RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYL3	P08590	195 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SNRPA1	P09661	255 aa	Known RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TYRP1	P17643	537 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CTSS	P25774	331 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ECHS1	P30084	290 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MAP2K6	P52564	334 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HK3	P52790	923 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DGCR2	P98153	550 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CHAF1A	Q13111	956 aa	Predicted RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	STK3	Q13188	491 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MST1L	Q2TV78	715 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DGKK	Q5KSL6	1271 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FNDC7	Q5VTL7	733 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	XRRA1	Q6P2D8	792 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RHOU	Q7L0Q8	258 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms