RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 Q6ZS52 159 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 MFSD6LQ8IWD5 586 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 ELMOD1Q8N336 334 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 DEPDC1BQ8WUY9 529 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 NACC1Q96RE7 527 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 TMEM60Q9H2L4 133 aa22.32■■□□□ 1.16
SQSTM1-215ENST00000514093 RALGAPA1Q6GYQ0 2036 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 HEPACAM2A8MVW5 462 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 K7ESF4 209 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 ARNTLO00327 626 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 PODXLO00592 558 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 CYP11B2P19099 503 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 PTGDRQ13258 359 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 CCDC6Q16204 474 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 CTXN3Q4LDR2 81 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 WDR44Q5JSH3 913 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 LONP2Q86WA8 852 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 FAM160A2Q8N612 972 aaPredicted RBP22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 TTC8Q8TAM2 541 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 CSGALNACT1Q8TDX6 532 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 RSPRY1Q96DX4 576 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 ZMAT2Q96NC0 199 aaKnown RBP22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 TM6SF1Q9BZW5 370 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 TUFT1Q9NNX1 390 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 TPCN1Q9ULQ1 816 aa22.31■■□□□ 1.16
SQSTM1-215ENST00000514093 ARHGEF35A5YM69 484 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 SLC38A8A6NNN8 435 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 BTBD18B2RXH4 712 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 H7C4K7 107 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 KPNA1P52294 538 aaPredicted RBP22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 FOSBP53539 338 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 MRPL58Q14197 206 aaKnown RBP22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 N4BP2L1Q5TBK1 243 aaPredicted RBP22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 IL31Q6EBC2 164 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 CEP68Q76N32 757 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 SLITRK6Q9H5Y7 841 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 ANGPTL2Q9UKU9 493 aa22.3■■□□□ 1.16
SQSTM1-215ENST00000514093 AXIN1O15169 862 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 PFKFB2O60825 505 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 FDPSP14324 419 aaKnown RBP22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 CNR2P34972 360 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 YARSP54577 528 aaKnown RBP22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 LRRC32Q14392 662 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 SF3A2Q15428 464 aaKnown RBP22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 TPGS2Q68CL5 300 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 TXNDC11Q6PKC3 985 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 ALKAL1Q6UXT8 129 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 YAF2Q8IY57 180 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 SHKBP1Q8TBC3 707 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 TRPV4Q9HBA0 871 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 ASAH2Q9NR71 780 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 RXFP3Q9NSD7 469 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 NUB1Q9Y5A7 615 aa22.29■■□□□ 1.16
SQSTM1-215ENST00000514093 SYN3O14994 580 aa22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 PPP2R5AQ15172 486 aa22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 AASDHQ4L235 1098 aaPredicted RBP22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 WASF1Q92558 559 aa22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 C18orf25Q96B23 403 aaPredicted RBP22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 AFF4Q9UHB7 1163 aaKnown RBP22.28■■□□□ 1.16
SQSTM1-215ENST00000514093 K7ERI5 159 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 PMLP29590 882 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 MCM7P33993 719 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 GRM5P41594 1212 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 XKR4Q5GH76 650 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 RNF19BQ6ZMZ0 732 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 DDX1Q92499 740 aaKnown RBP22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 IFT74Q96LB3 600 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 POLR3CQ9BUI4 534 aaPredicted RBP22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 CCDC94Q9BW85 323 aaPredicted RBP22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 CDT1Q9H211 546 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 ARRDC1-AS1Q9H2J1 176 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 TOPORSQ9NS56 1045 aaPredicted RBP22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 SLC38A7Q9NVC3 462 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 TNFSF13BQ9Y275 285 aa22.27■■□□□ 1.16
SQSTM1-215ENST00000514093 A0A1W2PRU2 124 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 EFNA5P52803 228 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 EPHA5P54756 1037 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 STXBP5Q5T5C0 1151 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 APBB1IPQ7Z5R6 666 aaPredicted RBP22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 DIS3L2Q8IYB7 885 aaKnown RBP22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 TMEM130Q8N3G9 435 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 ZFYVE19Q96K21 471 aa22.26■■□□□ 1.15
SQSTM1-215ENST00000514093 SPECC1L-ADORA2AF8WAN1 911 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 CHADO15335 359 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 PAPSS2O95340 614 aaPredicted RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 CPB1P15086 417 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 MCM4P33991 863 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 PXNP49023 591 aaPredicted RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 MLLT6P55198 1093 aaPredicted RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 PON2Q15165 354 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 ZNF568Q3ZCX4 644 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 ZNF280DQ6N043 979 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 NECAB1Q8N987 351 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 DDX12PQ92771 950 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 LRRC3BQ96PB8 259 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 ACO2Q99798 780 aaKnown RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 C8orf33Q9H7E9 229 aaPredicted RBP22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 GTSE1Q9NYZ3 720 aa22.25■■□□□ 1.15
SQSTM1-215ENST00000514093 PDCD11Q14690 1871 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms