RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TNFSF9P41273 254 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 NDUFV1P49821 464 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 CLCNKBP51801 687 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 ADAM15Q13444 863 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 KCNC3Q14003 757 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 TMEM132DQ14C87 1099 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 NFIL3Q16649 462 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 TJAP1Q5JTD0 557 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 SPATA1Q5VX52 437 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 RTL10Q7L3V2 364 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 KIAA0895Q8NCT3 520 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 HDAC7Q8WUI4 952 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 PPM1EQ8WY54 764 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 FBXL18Q96ME1 805 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 ZMAT2Q96NC0 199 aaKnown RBP8.88□□□□□ -0.99
NEDD4-210ENST00000513957 IPO9Q96P70 1041 aaKnown RBP8.88□□□□□ -0.99
NEDD4-210ENST00000513957 ASB2Q96Q27 587 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 VN1R3Q9BXE9 311 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 FGFBP2Q9BYJ0 223 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 AGPAT3Q9NRZ7 376 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 CLDND1Q9NY35 253 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 RBAKQ9NYW8 714 aaPredicted RBP8.88□□□□□ -0.99
NEDD4-210ENST00000513957 BOLA1Q9Y3E2 137 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 SCN1AP35498 2009 aa8.88□□□□□ -0.99
NEDD4-210ENST00000513957 SPTBN5Q9NRC6 3674 aaKnown RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 C2orf16Q68DN1 1984 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ZNF233A6NK53 670 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 LACTBL1A8MY62 500 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 PDXKO00764 312 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 MEFVO15553 781 aaPredicted RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 TGFB1I1O43294 461 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 FGFR3P22607 806 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 HOXD13P35453 343 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 PNPLA4P41247 253 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 NRIP1P48552 1158 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 AARSP49588 968 aaKnown RBP eCLIP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ACOT2P49753 483 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 SOX4Q06945 474 aaPredicted RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ENPEPQ07075 957 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 SMAD4Q13485 552 aaKnown RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 KIAA0319Q5VV43 1072 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 CRELD2Q6UXH1 353 aaPredicted RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 CYP26C1Q6V0L0 522 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ANKS3Q6ZW76 656 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ADGRD2Q7Z7M1 963 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 USP37Q86T82 979 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 GRAMD1CQ8IYS0 662 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 GUF1Q8N442 669 aaKnown RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 XXYLT1Q8NBI6 393 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 APPL2Q8NEU8 664 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 SPATA20Q8TB22 786 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 MRRFQ96E11 262 aaKnown RBP8.87□□□□□ -0.99
NEDD4-210ENST00000513957 SUSD3Q96L08 255 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ZNF560Q96MR9 790 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 GBP4Q96PP9 640 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 CBWD1Q9BRT8 395 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 GPR62Q9BZJ7 368 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 ALG2Q9H553 416 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 HSPBP1Q9NZL4 362 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 NUB1Q9Y5A7 615 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 HCFC2Q9Y5Z7 792 aa8.87□□□□□ -0.99
NEDD4-210ENST00000513957 HIDE1A8MVS5 230 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 TISP43B9A030 160 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 H7C4K7 107 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 MAPK13O15264 365 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CALUO43852 315 aaPredicted RBP8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CLASP2O75122 1294 aaKnown RBP8.86□□□□□ -0.99
NEDD4-210ENST00000513957 TBX10O75333 385 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 PAPLNO95428 1278 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 GLP2RO95838 553 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 C7P10643 843 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 KCNA5P22460 613 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CASP1P29466 404 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CA8P35219 290 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 LTBRP36941 435 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CLCN4P51793 760 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 AP3M2P53677 418 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 ITIH3Q06033 890 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 STK4Q13043 487 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 SNRNP35Q16560 246 aaKnown RBP8.86□□□□□ -0.99
NEDD4-210ENST00000513957 SEZ6Q53EL9 994 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 ZBTB41Q5SVQ8 909 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 FAM171A1Q5VUB5 890 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 JADE1Q6IE81 842 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 FOXR2Q6PJQ5 311 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 WDR49Q8IV35 697 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 SMRP1Q8NCR6 262 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 GLIS3Q8NEA6 775 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 SPATA18Q8TC71 538 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms