RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 ERMNQ8TAM6 284 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 KIFAP3Q92845 792 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 ZBTB45Q96K62 511 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-212ENST00000513538 IFT74Q96LB3 600 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 RUSC1Q9BVN2 902 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 TRMT61BQ9BVS5 477 aaKnown RBP10.57□□□□□ -0.72
TCOF1-212ENST00000513538 CRISPLD1Q9H336 500 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 ZFP14Q9HCL3 533 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 PPP4R2Q9NY27 417 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 CNTN3Q9P232 1028 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 ARHGAP28Q9P2N2 729 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.57□□□□□ -0.72
TCOF1-212ENST00000513538 PP2D1A8MPX8 630 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 K7ERI5 159 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 MICAL2O94851 1124 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 CHRNB1P11230 501 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 PSMC3P17980 439 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 ELF1P32519 619 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 EPHA5P54756 1037 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 PEX3P56589 373 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 SPEM2Q0P670 501 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 TWF1Q12792 350 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 TRIM29Q14134 588 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 TEAD2Q15562 447 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 SEZ6Q53EL9 994 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 GPR161Q8N6U8 529 aaKnown RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 SHKBP1Q8TBC3 707 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 FAM3CQ92520 227 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 SMARCD2Q92925 531 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 CCDC94Q9BW85 323 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 LRRC3Q9BY71 257 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 FAM126AQ9BYI3 521 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 LMAN1LQ9HAT1 526 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 DDX19AQ9NUU7 478 aaKnown RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 C2orf42Q9NWW7 574 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 TUBGCP4Q9UGJ1 667 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 CDV3Q9UKY7 258 aaKnown RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 MRPS17Q9Y2R5 130 aaKnown RBP10.56□□□□□ -0.72
TCOF1-212ENST00000513538 PIAS3Q9Y6X2 628 aa10.56□□□□□ -0.72
TCOF1-212ENST00000513538 CCDC169A6NNP5 214 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 PRR5-ARHGAP8B1AHC4 643 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 E9PMD0 336 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 HIP1RO75146 1068 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 OR4Q2P0C623 313 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 HARSP12081 509 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 MYL4P12829 197 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 MUTP22033 750 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 MCM4P33991 863 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 SOX9P48436 509 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.728e-6■■□□□ 12.8
TCOF1-212ENST00000513538 YARSP54577 528 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 ARHGAP8P85298 464 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 SRSF5Q13243 272 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 IL17AQ16552 155 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 SLC10A6Q3KNW5 377 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 STXBP5Q5T5C0 1151 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TPGS2Q68CL5 300 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 HAUS3Q68CZ6 603 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 ZNF280DQ6N043 979 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 Q6ZS52 159 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TMC8Q8IU68 726 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 ZSCAN18Q8TBC5 510 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 DDX12PQ92771 950 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 IRF7Q92985 503 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 SECISBP2LQ93073 1101 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 LRRC3BQ96PB8 259 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 DNAJC25Q9H1X3 360 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TRPV5Q9NQA5 729 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 RBM12Q9NTZ6 932 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 SLC38A7Q9NVC3 462 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 AFF4Q9UHB7 1163 aaKnown RBP10.55□□□□□ -0.72
TCOF1-212ENST00000513538 GMEB2Q9UKD1 530 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 YIPF1Q9Y548 306 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 NUB1Q9Y5A7 615 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 EML5Q05BV3 1969 aa10.55□□□□□ -0.72
TCOF1-212ENST00000513538 GREB1Q4ZG55 1949 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 SPAG17Q6Q759 2223 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 SDK1Q7Z5N4 2213 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 CHURC1-FNTBB4DL54 471 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 H7C4K7 107 aa10.54□□□□□ -0.72
TCOF1-212ENST00000513538 MAN2B1O00754 1011 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms