RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SPEGQ15772 3267 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 ZFYVE26Q68DK2 2539 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 ARNTLO00327 626 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 ACKR2O00590 384 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 IGFBP6P24592 240 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 CCNE1P24864 410 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 CCR2P41597 374 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 EPHA5P54756 1037 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 TMEM132AQ24JP5 1023 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 DCAF4L1Q3SXM0 396 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 ELMOD1Q8N336 334 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 FAM160A2Q8N612 972 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 PIGOQ8TEQ8 1089 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 LOXL4Q96JB6 756 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 ZSWIM3Q96MP5 696 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 GPR88Q9GZN0 384 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 C8orf33Q9H7E9 229 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 GDAQ9Y2T3 454 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 INSL5Q9Y5Q6 135 aa15.31■□□□□ 0.04
SPCS3-204ENST00000513139 FASNP49327 2511 aaKnown RBP15.31■□□□□ 0.04
SPCS3-204ENST00000513139 SYN3O14994 580 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 REC8O95072 547 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
SPCS3-204ENST00000513139 DGKKQ5KSL6 1271 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 IQCEQ6IPM2 695 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 C3orf58Q8NDZ4 430 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 ZNF512Q96ME7 567 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-204ENST00000513139 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-204ENST00000513139 CYP4F11Q9HBI6 524 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
SPCS3-204ENST00000513139 ATG2BQ96BY7 2078 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 H7C4K7 107 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 I3L4J1 428 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 CHADO15335 359 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 MOSPD3O75425 235 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 CDKL5O76039 1030 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 SEC24AO95486 1093 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 PRKCBP05771 671 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 ATP2B1P20020 1258 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 VIPR2P41587 438 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 BRCC3P46736 316 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 MRPL58Q14197 206 aaKnown RBP15.29■□□□□ 0.04
SPCS3-204ENST00000513139 AASDHQ4L235 1098 aaPredicted RBP15.29■□□□□ 0.04
SPCS3-204ENST00000513139 GLRA4Q5JXX5 417 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 CEP68Q76N32 757 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
SPCS3-204ENST00000513139 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 ZSCAN18Q8TBC5 510 aaPredicted RBP15.29■□□□□ 0.04
SPCS3-204ENST00000513139 OXER1Q8TDS5 423 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 IGF2RP11717 2491 aa15.29■□□□□ 0.04
SPCS3-204ENST00000513139 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 SMIM28A0A1B0GU29 152 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 PROS1P07225 676 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 NAMPTP43490 491 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 CALCRLQ16602 461 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 XKR4Q5GH76 650 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
SPCS3-204ENST00000513139 EEF1DP3Q658K8 133 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
SPCS3-204ENST00000513139 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 RALGPS2Q86X27 583 aaPredicted RBP15.28■□□□□ 0.04
SPCS3-204ENST00000513139 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
SPCS3-204ENST00000513139 ASAH2Q9NR71 780 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
SPCS3-204ENST00000513139 CCDC163A0A0D9SF12 145 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 MYBPHLA2RUH7 354 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 HEPACAM2A8MVW5 462 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 SPATA31C1P0DKV0 1188 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 TIE1P35590 1138 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 EFNA5P52803 228 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 PPP2R5AQ15172 486 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 ALKAL1Q6UXT8 129 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 YAF2Q8IY57 180 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 BSNDQ8WZ55 320 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 TUFT1Q9NNX1 390 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
SPCS3-204ENST00000513139 RBM12Q9NTZ6 932 aaKnown RBP15.27■□□□□ 0.04
SPCS3-204ENST00000513139 CEP72Q9P209 647 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
SPCS3-204ENST00000513139 FBXL5Q9UKA1 691 aa15.27■□□□□ 0.04
SPCS3-204ENST00000513139 NUP205Q92621 2012 aa15.27■□□□□ 0.03
SPCS3-204ENST00000513139 NCANO14594 1321 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 ZNF638Q14966 1978 aaKnown RBP15.26■□□□□ 0.03
SPCS3-204ENST00000513139 DENND4CQ5VZ89 1909 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 A0A087WWV3 80 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 EDN1P05305 212 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 MYL4P12829 197 aa15.26■□□□□ 0.03
SPCS3-204ENST00000513139 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms