RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 FBXL5Q9UKA1 691 aa13.68□□□□□ -0.22
UBE2D3-231ENST00000513098 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
UBE2D3-231ENST00000513098 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 OGTO15294 1046 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 CXCL8P10145 99 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 ELF1P32519 619 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 LIG4P49917 911 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 MCM6Q14566 821 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 NPAS3Q8IXF0 933 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 DDX12PQ92771 950 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 AFF4Q9UHB7 1163 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 POLIQ9UNA4 740 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 SRPRBQ9Y5M8 271 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
UBE2D3-231ENST00000513098 HNRNPDLO14979 420 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 ECI2O75521 394 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 FAM13AO94988 1023 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 SEC24AO95486 1093 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 RHOP08100 348 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 MCM4P33991 863 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 TNFSF9P41273 254 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 GPC5P78333 572 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 PRSS36Q5K4E3 855 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 MAP4K3Q8IVH8 894 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 BICD1Q96G01 975 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 SHDQ96IW2 340 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 ARHGEF3Q9NR81 526 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 FAM86C1Q9NVL1 165 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 DLGAP2Q9P1A6 1054 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 DERAQ9Y315 318 aa13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 MRPS23Q9Y3D9 190 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-231ENST00000513098 FRYLO94915 3013 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 K7ENM7 598 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 PRRG1O14668 218 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 ZNF197O14709 1029 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 GFRA3O60609 400 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 LRG1P02750 347 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 TYMPP19971 482 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SYT1P21579 422 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 EPHA5P54756 1037 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 PFKPQ01813 784 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 PRKCQQ04759 706 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SPATA1Q5VX52 437 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 POTEHQ6S545 545 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 STRA6Q9BX79 667 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 OSBPL6Q9BZF3 934 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 ASB7Q9H672 318 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 FBXO2Q9UK22 296 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 CA14Q9ULX7 337 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 SIT1Q9Y3P8 196 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 CLIC4Q9Y696 253 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 CACNA1IQ9P0X4 2223 aa13.65□□□□□ -0.22
UBE2D3-231ENST00000513098 F5P12259 2224 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 ZNF292O60281 2723 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 PIRO00625 290 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 LILRA4P59901 499 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 YWHAHQ04917 246 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 ANGPT1Q15389 498 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 SLC44A4Q53GD3 710 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 USP49Q70CQ1 688 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 LEMD2Q8NC56 503 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 ELSPBP1Q96BH3 223 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 HVCN1Q96D96 273 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 HSFX1Q9UBD0 423 aa13.64□□□□□ -0.23
UBE2D3-231ENST00000513098 SEL1LQ9UBV2 794 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms