RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 CYP4A11Q02928 519 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 RNASELQ05823 741 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 ZBTB41Q5SVQ8 909 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 MIS18BP1Q6P0N0 1132 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 PARM1Q6UWI2 310 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 UNQ6494/PRO21346Q6UXR6 183 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 OTUD6AQ7L8S5 288 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 ZNF598Q86UK7 904 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 SMYD4Q8IYR2 804 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 ANKRD20A12PQ8NF67 263 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 DUSP9Q99956 384 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 DDX23Q9BUQ8 820 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 MRPL17Q9NRX2 175 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 CTNND2Q9UQB3 1225 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 TRAF3IP3Q9Y228 551 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 ITIH6Q6UXX5 1313 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 A0A0U1RQF3 1178 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 TBCAO75347 108 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 PPP1R37O75864 691 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 RETP07949 1114 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 ATP1A3P13637 1013 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 TARSP26639 723 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 YWHABP31946 246 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 PBX1P40424 430 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 SLC26A2P50443 739 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 CLCN3P51790 818 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 UBASH3AP57075 661 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 MCCD1P59942 119 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 SNRPFP62306 86 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 MAPK7Q13164 816 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 MYBPC2Q14324 1141 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 NR1I3Q14994 352 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 TCP11X2Q5H9J9 407 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 STXBP4Q6ZWJ1 553 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 DYMQ7RTS9 669 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 IRF2BP1Q8IU81 584 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 GLYCTKQ8IVS8 523 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 ZNF507Q8TCN5 953 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 DDX1Q92499 740 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 IQCDQ96DY2 449 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 XPO4Q9C0E2 1151 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 KCTD10Q9H3F6 313 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 TBC1D13Q9NVG8 400 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 CGNQ9P2M7 1197 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
PDLIM5-217ENST00000512274 MYH9P35579 1960 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ZBTB42B2RXF5 422 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 PDXKO00764 312 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 B4GALT3O60512 393 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 LILRB3O75022 631 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 CSDE1O75534 798 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 C22orf31O95567 290 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 GNA14O95837 355 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 GLUD1P00367 558 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 IDEP14735 1019 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 FKBP3Q00688 224 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 PRKCQQ04759 706 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 MTAPQ13126 283 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 CSRP2Q16527 193 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 UGCGQ16739 394 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ZNF484Q5JVG2 852 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ZSCAN30Q86W11 494 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 ZNF280BQ86YH2 543 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 EXOC8Q8IYI6 725 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 CELF5Q8N6W0 485 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 HVCN1Q96D96 273 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 SCLT1Q96NL6 688 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 TSG101Q99816 390 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 NTPCRQ9BSD7 190 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 OSBPL6Q9BZF3 934 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 SAMSN1Q9NSI8 373 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 IFNKQ9P0W0 207 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 COL1A2P08123 1366 aa11.41□□□□□ -0.58
PDLIM5-217ENST00000512274 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms