RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	PBXIP1	Q96AQ6	731 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	PANK2	Q9BZ23	570 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZHX3	Q9H4I2	956 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	ASB7	Q9H672	318 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	RPF1	Q9H9Y2	349 aa	Known RBP	13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	KBTBD4	Q9NVX7	518 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	IGSF9	Q9P2J2	1179 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	CDY1	Q9Y6F8	540 aa		13.21	□□□□□ -0.29
CLDND1-223	ENST00000511081	PIEZO1	Q92508	2521 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	NOTCH4	Q99466	2003 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	CUTA	O60888	179 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	ASGR2	P07307	311 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	PAX3	P23760	479 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	MATR3	P43243	847 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	MTMR3	Q13615	1198 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	POSTN	Q15063	836 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	SHC4	Q6S5L8	630 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	FBXL6	Q8N531	539 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	MYADM	Q96S97	322 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	MSTO1	Q9BUK6	570 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	CUEDC2	Q9H467	287 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	KCNK12	Q9HB15	430 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	TUBGCP4	Q9UGJ1	667 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	MAFF	Q9ULX9	164 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	DERA	Q9Y315	318 aa		13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.2	□□□□□ -0.3
CLDND1-223	ENST00000511081	ANO9	A1A5B4	782 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	ARHGEF37	A1IGU5	675 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	TISP43	B9A030	160 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081		H7C4K7	107 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	XPOT	O43592	962 aa	Known RBP	13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	OAZ2	O95190	189 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	F13A1	P00488	732 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	C8A	P07357	584 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	LAMP2	P13473	410 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	ATF2	P15336	505 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PLA2G5	P39877	138 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	STAT6	P42226	847 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	ROR1	Q01973	937 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PPP2R3A	Q06190	1150 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	SPAG1	Q07617	926 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	KCNA1	Q09470	495 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	TDG	Q13569	410 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PPM1L	Q5SGD2	360 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	L1TD1	Q5T7N2	865 aa	Known RBP	13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	TPGS2	Q68CL5	300 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	ADAL	Q6DHV7	355 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	MAMSTR	Q6ZN01	415 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	TCEAL8	Q8IYN2	117 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	APPL2	Q8NEU8	664 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	KIF12	Q96FN5	646 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	IKZF4	Q9H2S9	585 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	MRPL44	Q9H9J2	332 aa	Known RBP	13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PIDD1	Q9HB75	910 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	AVEN	Q9NQS1	362 aa	Predicted RBP	13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	FBXL5	Q9UKA1	691 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	RCOR1	Q9UKL0	485 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	AGO2	Q9UKV8	859 aa	Known RBP	13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PCDHB8	Q9UN66	801 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	NUB1	Q9Y5A7	615 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	PCDHB13	Q9Y5F0	798 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	ANK1	P16157	1881 aa		13.19	□□□□□ -0.3
CLDND1-223	ENST00000511081	WDR27	A2RRH5	827 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	ANHX	E9PGG2	379 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	PIR	O00625	290 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	ACOT2	P49753	483 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	LILRA4	P59901	499 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	ALCAM	Q13740	583 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	LCE2D	Q5TA82	110 aa	Predicted RBP	13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	LIN9	Q5TKA1	542 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	JADE1	Q6IE81	842 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	TMEM130	Q8N3G9	435 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	PDILT	Q8N807	584 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	BEST2	Q8NFU1	509 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	SLC7A14	Q8TBB6	771 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	ACCS	Q96QU6	501 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	LRRC27	Q9C0I9	530 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	TNMD	Q9H2S6	317 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	SMOC2	Q9H3U7	446 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	PANK4	Q9NVE7	773 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	C2CD2	Q9Y426	696 aa		13.18	□□□□□ -0.3
CLDND1-223	ENST00000511081	CACNA1H	O95180	2353 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	XYLB	O75191	536 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	TYMP	P19971	482 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	GART	P22102	1010 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	FSHR	P23945	695 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	MCM4	P33991	863 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	CASP5	P51878	434 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	PKP1	Q13835	747 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	NT5DC4	Q86YG4	428 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	SLC44A3	Q8N4M1	653 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	IQUB	Q8NA54	791 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	KCNG4	Q8TDN1	519 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	TRIM9	Q9C026	710 aa		13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	DNMT3B	Q9UBC3	853 aa	Known RBP	13.17	□□□□□ -0.3
CLDND1-223	ENST00000511081	KCNH3	Q9ULD8	1083 aa		13.17	□□□□□ -0.3

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