RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 C1orf220Q5T0J3 134 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
NFKB1-209ENST00000510638 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 APTXQ7Z2E3 356 aaKnown RBP9.33□□□□□ -0.92
NFKB1-209ENST00000510638 DRC7Q8IY82 874 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 EFCAB13Q8IY85 973 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 LRRC43Q8N309 656 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 OR5B17Q8NGF7 314 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 PHOSPHO2Q8TCD6 241 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 TAF4BQ92750 862 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 TOP1MTQ969P6 601 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 VWCEQ96DN2 955 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 IQCDQ96DY2 449 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
NFKB1-209ENST00000510638 MRFAP1L1Q96HT8 127 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 UROC1Q96N76 676 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 PPP1R10Q96QC0 940 aaKnown RBP9.33□□□□□ -0.92
NFKB1-209ENST00000510638 ERGIC2Q96RQ1 377 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 YME1L1Q96TA2 773 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.33□□□□□ -0.927e-6■□□□□ 9.4
NFKB1-209ENST00000510638 ZBED2Q9BTP6 218 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 ZNF576Q9H609 170 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 EPHX3Q9H6B9 360 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 RAB20Q9NX57 234 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 GCNT4Q9P109 453 aa9.33□□□□□ -0.92
NFKB1-209ENST00000510638 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-209ENST00000510638 PRRC2BQ5JSZ5 2229 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 MYH11P35749 1972 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 PTGESO14684 152 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 MEFVO15553 781 aaPredicted RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 HLA-DRAP01903 254 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ITGB3P05106 788 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 P4HA1P13674 534 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ATP2A2P16615 1042 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 DNAJB2P25686 324 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ATICP31939 592 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 EPHB4P54760 987 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 DEFB103AP81534 67 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 TUSC3Q13454 348 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 SYCP1Q15431 976 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 CLLU1OSQ5K130 101 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 C15orf39Q6ZRI6 1047 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 LRRC52Q8N7C0 313 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 C1orf127Q8N9H9 656 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 NEK11Q8NG66 645 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 TAS1R2Q8TE23 839 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 C18orf25Q96B23 403 aaPredicted RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 FAM81BQ96LP2 452 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 RNPC3Q96LT9 517 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ZNF560Q96MR9 790 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 ZMAT2Q96NC0 199 aaKnown RBP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 NT5C1BQ96P26 610 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 NUP58Q9BVL2 599 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 TBC1D13Q9NVG8 400 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 TUBGCP4Q9UGJ1 667 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 AGAP1Q9UPQ3 857 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 COQ4Q9Y3A0 265 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 DAAM1Q9Y4D1 1078 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.32□□□□□ -0.92
NFKB1-209ENST00000510638 SIP14410 1827 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 CHD9Q3L8U1 2897 aa9.32□□□□□ -0.92
NFKB1-209ENST00000510638 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 ARHGEF37A1IGU5 675 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CASTOR2A6NHX0 329 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 PRR33A8MZF0 331 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 TEX33O43247 280 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 DGKIO75912 1065 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 GJB5O95377 273 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 RFX1P22670 979 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CDC25BP30305 580 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 LRPAP1P30533 357 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 NHLH1Q02575 133 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 TRIM14Q14142 442 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 BTG3Q14201 252 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 ZNF699Q32M78 642 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 SV2CQ496J9 727 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 SPOUT1Q5T280 376 aaKnown RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 C9orf57Q5W0N0 161 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 SPECC1LQ69YQ0 1117 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 PPFIBP1Q86W92 1011 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 VSTM4Q8IW00 320 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CMTR2Q8IYT2 770 aaKnown RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 GSTCDQ8NEC7 633 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 PPM1EQ8WY54 764 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 HPDLQ96IR7 371 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CASD1Q96PB1 797 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 TMEM175Q9BSA9 504 aa9.31□□□□□ -0.92
NFKB1-209ENST00000510638 CRACR2AQ9BSW2 395 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms