RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GTF3C3Q9Y5Q9 886 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 NOTCH4Q99466 2003 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 POU2F2P09086 479 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 GUCY2FP51841 1108 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 VCPP55072 806 aaKnown RBP24.97■■□□□ 1.59
SNF8-209ENST00000510558 NTHL1P78549 312 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 ADALQ6DHV7 355 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 SLFN12LQ6IEE8 588 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 RTL10Q7L3V2 364 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 CD302Q8IX05 232 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 APPL2Q8NEU8 664 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 ZNF461Q8TAF7 563 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 STRA6Q9BX79 667 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 IKZF4Q9H2S9 585 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 TBC1D7Q9P0N9 293 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 FBXL5Q9UKA1 691 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 PCDHB8Q9UN66 801 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 DUSP12Q9UNI6 340 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 STYXL1Q9Y6J8 313 aa24.97■■□□□ 1.59
SNF8-209ENST00000510558 WDR27A2RRH5 827 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 PPP6R2O75170 966 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 YEATS4O95619 227 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 LAMP2P13473 410 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 IDEP14735 1019 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 ACOT2P49753 483 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 ARPP19P56211 112 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 CTXN3Q4LDR2 81 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 JADE1Q6IE81 842 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 RSAD2Q8WXG1 361 aa24.96■■□□□ 1.59
SNF8-209ENST00000510558 ABLIM3O94929 683 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 ZSCAN22P10073 491 aaPredicted RBP24.95■■□□□ 1.58
SNF8-209ENST00000510558 PDIA4P13667 645 aaKnown RBP24.95■■□□□ 1.58
SNF8-209ENST00000510558 IER5LQ5T953 404 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 SPATA1Q5VX52 437 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 ZNF280DQ6N043 979 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 BEST2Q8NFU1 509 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 NXPE3Q969Y0 559 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 OLFML3Q9NRN5 406 aa24.95■■□□□ 1.58
SNF8-209ENST00000510558 AGO2Q9UKV8 859 aaKnown RBP24.95■■□□□ 1.58
SNF8-209ENST00000510558 FRMD3A2A2Y4 597 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 M0QZQ0 153 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 GCNT3O95395 438 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 NFICP08651 508 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 AVPR2P30518 371 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 ELF1P32519 619 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 AARSP49588 968 aaKnown RBP eCLIP24.94■■□□□ 1.58
SNF8-209ENST00000510558 L1TD1Q5T7N2 865 aaKnown RBP24.94■■□□□ 1.58
SNF8-209ENST00000510558 POMGNT1Q8WZA1 660 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 HCFC1R1Q9NWW0 138 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 EXOC7Q9UPT5 735 aa24.94■■□□□ 1.58
SNF8-209ENST00000510558 ZFP37Q9Y6Q3 630 aaPredicted RBP24.94■■□□□ 1.58
SNF8-209ENST00000510558 PRRG1O14668 218 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 PPEF2O14830 753 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 F13A1P00488 732 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 ATF2P15336 505 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 KCNA1Q09470 495 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 TMEM132DQ14C87 1099 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 POSTNQ15063 836 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 PRSS33Q8NF86 280 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 ACCSQ96QU6 501 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 ASB7Q9H672 318 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 PANK4Q9NVE7 773 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 DNMT3BQ9UBC3 853 aaKnown RBP24.93■■□□□ 1.58
SNF8-209ENST00000510558 CDH7Q9ULB5 785 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 DERAQ9Y315 318 aa24.93■■□□□ 1.58
SNF8-209ENST00000510558 SCN1AP35498 2009 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 TSC2P49815 1807 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 ARHGEF37A1IGU5 675 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 ANHXE9PGG2 379 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 NARSO43776 548 aaKnown RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 CUTAO60888 179 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 ADSSP30520 456 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 CASP5P51878 434 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 YWHAHQ04917 246 aaPredicted RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 FOXD4L6Q3SYB3 417 aaPredicted RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 PABPC1LQ4VXU2 614 aaKnown RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 TPGS2Q68CL5 300 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 FOXD4L3Q6VB84 417 aaPredicted RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 DSTYKQ6XUX3 929 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 SLC44A3Q8N4M1 653 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 ITFG1Q8TB96 612 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 PRRX2Q99811 253 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 TNMDQ9H2S6 317 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 CYP4F11Q9HBI6 524 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 PCDHB13Q9Y5F0 798 aa24.92■■□□□ 1.58
SNF8-209ENST00000510558 TIMM13Q9Y5L4 95 aaPredicted RBP24.92■■□□□ 1.58
SNF8-209ENST00000510558 TCHHQ07283 1943 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 SEC24AO95486 1093 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 LRG1P02750 347 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 POU5F1Q01860 360 aaKnown RBP24.91■■□□□ 1.58
SNF8-209ENST00000510558 NHLH1Q02575 133 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 HTR4Q13639 388 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 ALCAMQ13740 583 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 E2F4Q16254 413 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 C9orf57Q5W0N0 161 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 CRELD2Q6UXH1 353 aaPredicted RBP24.91■■□□□ 1.58
SNF8-209ENST00000510558 CCDC65Q8IXS2 484 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 TCEAL8Q8IYN2 117 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 SPRYD3Q8NCJ5 442 aa24.91■■□□□ 1.58
SNF8-209ENST00000510558 FGF13Q92913 245 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms