RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TRIM28Q13263 835 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 RIBC1Q8N443 379 aaPredicted RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SMAPO00193 183 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SUPT3HO75486 399 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 FAM107AO95990 144 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SLC9A1P19634 815 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ACOT2P49753 483 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 TMEM154Q6P9G4 183 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 KDELC2Q7Z4H8 507 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 TEKT4Q8WW24 435 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 OTUB1Q96FW1 271 aaPredicted RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 AGAP1Q9UPQ3 857 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 CHMP2BQ9UQN3 213 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 WEE2P0C1S8 567 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ADRA2BP18089 450 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 NCOA4Q13772 614 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 KYNUQ16719 465 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 COBLL1Q53SF7 1204 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 XKR3Q5GH77 459 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ZNF772Q68DY9 489 aaPredicted RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 NOA1Q8NC60 698 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 ZNF507Q8TCN5 953 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ARHGEF40Q8TER5 1519 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 B2RBV5 119 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 TLR2O60603 784 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SRP72O76094 671 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 DDX5P17844 614 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 CDH2P19022 906 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 ITGA8P53708 1063 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 RBP5P82980 135 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SBK1Q52WX2 424 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 THEMIS2Q5TEJ8 643 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 TRAPPC11Q7Z392 1133 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 PRUNE1Q86TP1 453 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 NUP93Q8N1F7 819 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 KRT35Q92764 455 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 PAK5Q9P286 719 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SNRPAP09012 282 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 MYL2P10916 166 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SEC24CP53992 1094 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 CENPCQ03188 943 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 DMC1Q14565 340 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 TRIP10Q15642 601 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 PTGISQ16647 500 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 ANO4Q32M45 955 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 KIF2BQ8N4N8 673 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 PTPRN2Q92932 1015 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 MRGBPQ9NV56 204 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 RXRBP28702 533 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 COPB2P35606 906 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 RGS7P49802 495 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SLC30A9Q6PML9 568 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 LVRNQ6Q4G3 990 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 C3orf62Q6ZUJ4 267 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEK1-206ENST00000510533 HNRNPLLQ8WVV9 542 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 ANKS1AQ92625 1134 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 SYN2Q92777 582 aaPredicted RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 ELMO2Q96JJ3 720 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 ALG6Q9Y672 507 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 APOBEC3FQ8IUX4 373 aaKnown RBP11.11□□□□□ -0.63
NEK1-206ENST00000510533 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
NEK1-206ENST00000510533 AIM2O14862 343 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 KRT16P08779 473 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 CPB1P15086 417 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 SPRP35270 261 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 KLK7P49862 253 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 C6orf10Q5SRN2 563 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 TTC39BQ5VTQ0 682 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 CLEC4FQ8N1N0 589 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 STX19Q8N4C7 294 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 TTC30BQ8N4P2 665 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms