RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 PIAS3Q9Y6X2 628 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 DOCK8Q8NF50 2099 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 DCDC2BA2VCK2 349 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
DDX41-211ENST00000510171 DMDP11532 3685 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 MYL4P12829 197 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 TDGF1P13385 188 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 MCM4P33991 863 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 VIPR2P41587 438 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 CXCL12P48061 93 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX41-211ENST00000510171 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 DMP1Q13316 513 aaPredicted RBP11.39□□□□□ -0.59
DDX41-211ENST00000510171 PDIA5Q14554 519 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 LPAL2Q16609 132 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 TTC38Q5R3I4 469 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 LAIR1Q6GTX8 287 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 ZSCAN18Q8TBC5 510 aaPredicted RBP11.39□□□□□ -0.59
DDX41-211ENST00000510171 DDX12PQ92771 950 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 C8orf76Q96K31 380 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 SUSD3Q96L08 255 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 GPR88Q9GZN0 384 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
DDX41-211ENST00000510171 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 KMT5AQ9NQR1 393 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 ASAH2Q9NR71 780 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
DDX41-211ENST00000510171 CEP72Q9P209 647 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 CACNA1AO00555 2505 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 GPR179Q6PRD1 2367 aa11.39□□□□□ -0.59
DDX41-211ENST00000510171 HEPACAM2A8MVW5 462 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 HIP1RO75146 1068 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 MOSPD3O75425 235 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 RETP07949 1114 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 CHRNB1P11230 501 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 HARSP12081 509 aaKnown RBP11.38□□□□□ -0.59
DDX41-211ENST00000510171 GJA1P17302 382 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 PROZP22891 400 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 CCNE1P24864 410 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 EPHA5P54756 1037 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 MLLT6P55198 1093 aaPredicted RBP11.38□□□□□ -0.59
DDX41-211ENST00000510171 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
DDX41-211ENST00000510171 MPZL3Q6UWV2 235 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 MFSD6LQ8IWD5 586 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 C4orf32Q8N8J7 132 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 SNX29Q8TEQ0 813 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 E2F7Q96AV8 911 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 TBC1D32Q96NH3 1257 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 SLITRK6Q9H5Y7 841 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 ARHGAP28Q9P2N2 729 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 COL4A3Q01955 1670 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
DDX41-211ENST00000510171 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 TDRD15B5MCY1 1934 aaKnown RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 LRP3O75074 770 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 KRT37O76014 449 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 CPB1P15086 417 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 KPNA1P52294 538 aaPredicted RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 STRN3Q13033 797 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 SIM2Q14190 667 aaPredicted RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 TEAD2Q15562 447 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 SLC10A6Q3KNW5 377 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 TAS1R3Q7RTX0 852 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 DAW1Q8N136 415 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 SPEM1Q8N4L4 309 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 MSANTD3Q96H12 275 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 LLPHQ9BRT6 129 aaKnown RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 NTPCRQ9BSD7 190 aaKnown RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 OXCT2Q9BYC2 517 aaPredicted RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 RAB34Q9BZG1 259 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 KCNG1Q9UIX4 513 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 NOL7Q9UMY1 257 aaKnown RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
DDX41-211ENST00000510171 ZNF292O60281 2723 aa11.37□□□□□ -0.59
DDX41-211ENST00000510171 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 E9PMD0 336 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 ABLIM1O14639 778 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 SLC16A4O15374 487 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 MEFVO15553 781 aaPredicted RBP11.36□□□□□ -0.59
DDX41-211ENST00000510171 HRO43593 1189 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 TOM1L1O75674 476 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 OAZ2O95190 189 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 SEC24BO95487 1268 aa11.36□□□□□ -0.59
DDX41-211ENST00000510171 CNR2P34972 360 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms