RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 SLC23A3Q6PIS1 610 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 ANO5Q75V66 913 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 RNF149Q8NC42 400 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 PIP4K2CQ8TBX8 421 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 SLC7A3Q8WY07 619 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 ZNF512Q96ME7 567 aaPredicted RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 TPSD1Q9BZJ3 242 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 CEP72Q9P209 647 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 PARP2Q9UGN5 583 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 TAF6LQ9Y6J9 622 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 PLXND1Q9Y4D7 1925 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 E7EWF7 191 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 PTGESO14684 152 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 TRDMT1O14717 391 aaKnown RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 CAPN9O14815 690 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 MAP3K13O43283 966 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 OPHN1O60890 802 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 CD59P13987 128 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 ARF4P18085 180 aaPredicted RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 ATXN3P54252 364 aaPredicted RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 NAB2Q15742 525 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 SYT12Q8IV01 421 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 ARID3BQ8IVW6 561 aaPredicted RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
SNF8-207ENST00000509995 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 TMEM143Q96AN5 459 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 ACDQ96AP0 544 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 CHFRQ96EP1 664 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 RIT2Q99578 217 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 IL25Q9H293 177 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 PRORYQ9H606 182 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 TMEM74BQ9NUR3 256 aa11.97□□□□□ -0.49
SNF8-207ENST00000509995 MYO9AB2RTY4 2548 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 A0A1W2PRU2 124 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CAPN8A6NHC0 703 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 TMEM189-UBE2V1I3L0A0 370 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 HIP1O00291 1037 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 DPYSL4O14531 572 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 TNFRSF10BO14763 440 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 MSH4O15457 936 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 NPTXRO95502 500 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CIITAP33076 1130 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CFHR1Q03591 330 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 KCNC4Q03721 635 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CYP4F3Q08477 520 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 TWF1Q12792 350 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 PTPAQ15257 358 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 AMHR2Q16671 573 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 STXBP5Q5T5C0 1151 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 NFXL1Q6ZNB6 911 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 MIER3Q7Z3K6 550 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
SNF8-207ENST00000509995 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 CAMK1GQ96NX5 476 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 GTPBP2Q9BX10 602 aaKnown RBP11.96□□□□□ -0.49
SNF8-207ENST00000509995 TEKT3Q9BXF9 490 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 DHX33Q9H6R0 707 aaKnown RBP11.96□□□□□ -0.49
SNF8-207ENST00000509995 OBP2AQ9NY56 170 aa11.96□□□□□ -0.49
SNF8-207ENST00000509995 TRIP11Q15643 1979 aa11.96□□□□□ -0.5
SNF8-207ENST00000509995 ATXN2Q99700 1313 aaKnown RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 INO80B-WBP1J3KQ70 363 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 B3GAT3O94766 335 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 CFIP05156 583 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 THP07101 528 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 DRD1P21728 446 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 IGFBP6P24592 240 aaPredicted RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 PTENP60484 403 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 FBXO43Q4G163 708 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 SLC27A1Q6PCB7 646 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 CDR2LQ86X02 465 aaPredicted RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 MINDY1Q8N5J2 469 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 TSTD1Q8NFU3 115 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 SLC5A5Q92911 643 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 POLMQ9NP87 494 aaPredicted RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 FSCN3Q9NQT6 498 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
SNF8-207ENST00000509995 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
SNF8-207ENST00000509995 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 I3L4J1 428 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 ASAP2O43150 1006 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 SH3BP5O60239 455 aa11.94□□□□□ -0.5
SNF8-207ENST00000509995 PRAMEF12O95522 483 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms