RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SMIM24O75264 130 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 HOXB7P09629 217 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PABPC4LP0CB38 370 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 TSPY4P0CV99 314 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TSPY10P0CW01 314 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ATF2P15336 505 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 DRD4P21917 467 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 RPS6KB1P23443 525 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TCF7P36402 384 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 IFNAR2P48551 515 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 EIF3BP55884 814 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 GNGT1P63211 74 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 FOXO4P98177 505 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CYP4F8P98187 520 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 BNIP1Q12981 228 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 SAFB2Q14151 953 aaKnown RBP eCLIP2.45□□□□□ -2.02
CAST-226ENST00000509529 PLS1Q14651 629 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 KPNB1Q14974 876 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 ENOX2Q16206 610 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 NDUFA5Q16718 116 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ME3Q16798 604 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ZCWPW2Q504Y3 356 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CCDC92Q53HC0 331 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 ZC3H14Q6PJT7 736 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 RGS9BPQ6ZS82 235 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LINC00299Q6ZSB3 139 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CCDC121Q6ZUS5 278 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TMC7Q7Z402 723 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LIMS2Q7Z4I7 341 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CKAP2LQ8IYA6 745 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CARFQ8N187 725 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CHST13Q8NET6 341 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 SYTL5Q8TDW5 730 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 NSMCE1Q8WV22 266 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 KIFAP3Q92845 792 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LRRC45Q96CN5 670 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TCTN2Q96GX1 697 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CCDC114Q96M63 670 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ZNF317Q96PQ6 595 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 TUBGCP5Q96RT8 1024 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 HNRNPABQ99729 332 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 ASPNQ9BXN1 380 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TAF1DQ9H5J8 278 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 PALMDQ9NP74 551 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LIMA1Q9UHB6 759 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 ZNF652Q9Y2D9 606 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ATP6V0A2Q9Y487 856 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 USP16Q9Y5T5 823 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 HCFC2Q9Y5Z7 792 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 KIDINS220Q9ULH0 1771 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ZNF536O15090 1300 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 USP31Q70CQ4 1352 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LAMB1P07942 1786 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 DLEC1Q9Y238 1755 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LRRD1A4D1F6 860 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 GOLGA6L4A6NEF3 574 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ZNF701M0R085 212 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 DNM1LO00429 736 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 MFAP3LO75121 409 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ANP32DO95626 131 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PLATP00750 562 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 NUDT17P0C025 328 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ANXA13P27216 316 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TNNI2P48788 182 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 RCAN1P53805 252 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 HDLBPQ00341 1268 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 HSPA14Q0VDF9 509 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LAPTM5Q13571 262 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CCDC153Q494R4 210 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 Q4G0T1 1027 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PDCD4Q53EL6 469 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 ERMARDQ5T6L9 678 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ANO7Q6IWH7 933 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 BTNL9Q6UXG8 535 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 USP51Q70EK9 711 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 DDX42Q86XP3 938 aaKnown RBP eCLIP2.45□□□□□ -2.02
CAST-226ENST00000509529 MYLK4Q86YV6 388 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 NELFCDQ8IXH7 590 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TSPYL6Q8N831 410 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 SYT2Q8N9I0 419 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 PGM2Q96G03 612 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 ZNF274Q96GC6 653 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 CCDC34Q96HJ3 373 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 CDK5RAP3Q96JB5 506 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PBKQ96KB5 322 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 SNX27Q96L92 541 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 OLFM3Q96PB7 478 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 EIF2AQ9BY44 585 aaKnown RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 EDEM3Q9BZQ6 932 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 VPS11Q9H270 941 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 VCXQ9H320 206 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 STK32BQ9NY57 414 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PTTG2Q9NZH5 202 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TMOD4Q9NZQ9 345 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 PRKAG3Q9UGI9 489 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 LNPEPQ9UIQ6 1025 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 TTC7AQ9ULT0 858 aaPredicted RBP2.45□□□□□ -2.02
CAST-226ENST00000509529 LRCH1Q9Y2L9 728 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 SH3GLB1Q9Y371 365 aa2.45□□□□□ -2.02
CAST-226ENST00000509529 DIP2CQ9Y2E4 1556 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms