RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TMEM206Q9H813 350 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 MAGEF1Q9HAY2 307 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 DERAQ9Y315 318 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 ARIH1Q9Y4X5 557 aaPredicted RBP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 STYXL1Q9Y6J8 313 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ARHGEF37A1IGU5 675 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ANKRD63C9JTQ0 380 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ADAM12O43184 909 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 FAM189A1O60320 539 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 PAPLNO95428 1278 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ACOT2P49753 483 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ZBTB6Q15916 424 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 CTXN3Q4LDR2 81 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 ZBTB41Q5SVQ8 909 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 SLC8B1Q6J4K2 584 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 DSTYKQ6XUX3 929 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 BMP8AQ7Z5Y6 402 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 USP37Q86T82 979 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 OXCT2Q9BYC2 517 aaPredicted RBP20.25■□□□□ 0.83
UBE3D-207ENST00000509102 PCDHB8Q9UN66 801 aa20.25■□□□□ 0.83
UBE3D-207ENST00000509102 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 FRMD3A2A2Y4 597 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 TULP1O00294 542 aaPredicted RBP20.24■□□□□ 0.83
UBE3D-207ENST00000509102 PRRG1O14668 218 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 PPP1R37O75864 691 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 LDHAP00338 332 aaKnown RBP20.24■□□□□ 0.83
UBE3D-207ENST00000509102 ADRB2P07550 413 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 IGFBP6P24592 240 aaPredicted RBP20.24■□□□□ 0.83
UBE3D-207ENST00000509102 ARPP19P56211 112 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 SPATA1Q5VX52 437 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 JADE1Q6IE81 842 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 GET4Q7L5D6 327 aaPredicted RBP20.24■□□□□ 0.83
UBE3D-207ENST00000509102 ZNF461Q8TAF7 563 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 IGSF9Q9P2J2 1179 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
UBE3D-207ENST00000509102 VWA8A3KMH1 1905 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 C2orf16Q68DN1 1984 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 CCL16O15467 120 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 TRIOO75962 3097 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 IL18RAPO95256 599 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 LRG1P02750 347 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 ASGR2P07307 311 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 POU2F2P09086 479 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 FSHRP23945 695 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 ASIC1P78348 528 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 ROR1Q01973 937 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 YWHAHQ04917 246 aaPredicted RBP20.23■□□□□ 0.83
UBE3D-207ENST00000509102 PDCD11Q14690 1871 aaKnown RBP20.23■□□□□ 0.83
UBE3D-207ENST00000509102 SHC4Q6S5L8 630 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 FEZF2Q8TBJ5 459 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 NXPE3Q969Y0 559 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 STRA6Q9BX79 667 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 KBTBD4Q9NVX7 518 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 RAPGEFL1Q9UHV5 662 aa20.23■□□□□ 0.83
UBE3D-207ENST00000509102 ZFP37Q9Y6Q3 630 aaPredicted RBP20.23■□□□□ 0.83
UBE3D-207ENST00000509102 TISP43B9A030 160 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 POLR2DO15514 142 aaKnown RBP20.22■□□□□ 0.83
UBE3D-207ENST00000509102 CPB1P15086 417 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 GARTP22102 1010 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 DNM1Q05193 864 aaKnown RBP20.22■□□□□ 0.83
UBE3D-207ENST00000509102 TDGQ13569 410 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 E2F4Q16254 413 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 TPGS2Q68CL5 300 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 RSPO2Q6UXX9 243 aaPredicted RBP20.22■□□□□ 0.83
UBE3D-207ENST00000509102 GRASPQ7Z6J2 395 aaPredicted RBP20.22■□□□□ 0.83
UBE3D-207ENST00000509102 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 TRIM9Q9C026 710 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 EPS15L1Q9UBC2 864 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 FBXL5Q9UKA1 691 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 MAFFQ9ULX9 164 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 PCDHA7Q9UN72 937 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 ATP6V1DQ9Y5K8 247 aa20.22■□□□□ 0.83
UBE3D-207ENST00000509102 M0QZQ0 153 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 NFICP08651 508 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 ODC1P11926 461 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 ATF2P15336 505 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 PKP1Q13835 747 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 MRPL58Q14197 206 aaKnown RBP20.21■□□□□ 0.83
UBE3D-207ENST00000509102 CEP57L1Q8IYX8 460 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 FBXL6Q8N531 539 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 CYP4F11Q9HBI6 524 aa20.21■□□□□ 0.83
UBE3D-207ENST00000509102 TECTAO75443 2155 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 WDR27A2RRH5 827 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 KIAA0391O15091 583 aaKnown RBP20.2■□□□□ 0.82
UBE3D-207ENST00000509102 ABLIM3O94929 683 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 ADSSP30520 456 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.82
UBE3D-207ENST00000509102 CASP5P51878 434 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 KRT85P78386 507 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 KCNA1Q09470 495 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 BECN1Q14457 450 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 ARMCX5Q6P1M9 558 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 ELMOD1Q8N336 334 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms