RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 REXO4Q9GZR2 422 aaKnown RBP3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 SPC25Q9HBM1 224 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 LANCL2Q9NS86 450 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 KCTD5Q9NXV2 234 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 HSFX1Q9UBD0 423 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 APOBEC2Q9Y235 224 aaKnown RBP3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 TRIM38O00635 465 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 ENPP3O14638 875 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 ERN1O75460 977 aaKnown RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 CKBP12277 381 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 MCAMP43121 646 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 SLFN5Q08AF3 891 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 MALLQ13021 153 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 EZH2Q15910 746 aaKnown RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 MUM1L1Q5H9M0 696 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZNF529Q6P280 563 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 STRA8Q7Z7C7 330 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 MORC4Q8TE76 937 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 SSH3Q8TE77 659 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 TGFBRAP1Q8WUH2 860 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 STON2Q8WXE9 905 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 PTCD3Q96EY7 689 aaKnown RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 MARS2Q96GW9 593 aaKnown RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 UROC1Q96N76 676 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 UHRF1Q96T88 793 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 TTC1Q99614 292 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 QRSL1Q9H0R6 528 aaKnown RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 LDAHQ9H6V9 325 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 VTA1Q9NP79 307 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 AJAP1Q9UKB5 411 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 ACTL7AQ9Y615 435 aa3.15□□□□□ -1.91
DEPDC1B-204ENST00000509006 TP73O15350 636 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 TPD52L2O43399 206 aaKnown RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 EIF3JO75822 258 aaKnown RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 ENDOD1O94919 500 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 S100BP04271 92 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 AMY1AP04745 511 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 MTHFD2P13995 350 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 NOMO3P69849 1222 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 ATP8B2P98198 1209 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 MGAT2Q10469 447 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 MTM1Q13496 603 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 NOMO1Q15155 1222 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 SRSF7Q16629 238 aaKnown RBP eCLIP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 GEN1Q17RS7 908 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 NOMO2Q5JPE7 1267 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 FAM180AQ6UWF9 173 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 CRELD2Q6UXH1 353 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 UBE3BQ7Z3V4 1068 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 PRPF38AQ8NAV1 312 aaKnown RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 OR2I1PQ8NGU4 316 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 NUP133Q8WUM0 1156 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 TIMP4Q99727 224 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 HEPHQ9BQS7 1158 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 ACE2Q9BYF1 805 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 SENP6Q9GZR1 1112 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 RIPOR2Q9Y4F9 1068 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 ENTPD2Q9Y5L3 495 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 COL4A3BPQ9Y5P4 624 aa3.14□□□□□ -1.91
DEPDC1B-204ENST00000509006 GOLGA8AA7E2F4 631 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 TEX33O43247 280 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 PROM1O43490 865 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 GPR32O75388 356 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 SRGNP10124 158 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 WT1P19544 449 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 ITPKBP27987 946 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 FOLR3P41439 243 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 GPR3P46089 330 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 MTNR1BP49286 362 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 PER3P56645 1201 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 EXOSC10Q01780 885 aaKnown RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 STRN3Q13033 797 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 DACT2Q5SW24 774 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 VWA1Q6PCB0 445 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 FOXR2Q6PJQ5 311 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 DDX46Q7L014 1031 aaKnown RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 PTF1AQ7RTS3 328 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 COLGALT2Q8IYK4 626 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZGPATQ8N5A5 531 aaKnown RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 SARAFQ96BY9 339 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 CYFIP2Q96F07 1278 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 MED15Q96RN5 788 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 PNKPQ96T60 521 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 CPNE5Q9HCH3 593 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 TMEM140Q9NV12 185 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 GEMIN8Q9NWZ8 242 aaKnown RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 VSX1Q9NZR4 365 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 DMTF1Q9Y222 760 aa3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 MTO1Q9Y2Z2 717 aaKnown RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 FNDC1Q4ZHG4 1894 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1B-204ENST00000509006 LOC102724159A0A0B4J2E5 919 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 A0A1W2PS29 197 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 CDHR4A6H8M9 788 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 BMP15O95972 392 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 ELFN1P0C7U0 828 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 FCER1AP12319 257 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms