RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PLVAPQ9BX97 442 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 TOPORSQ9NS56 1045 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 TMEM110-MUSTN1A8MSY1 372 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 MAGEB2O15479 319 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 LGALS2P05162 132 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CYP1A2P05177 515 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 EDN1P05305 212 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 HOXD8P13378 290 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CYP11B1P15538 503 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CHRNB2P17787 502 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 POU5F1Q01860 360 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 SURF1Q15526 300 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 NAA35Q5VZE5 725 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 TMC3Q7Z5M5 1100 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 PLEKHH3Q7Z736 793 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 BRSK2Q8IWQ3 736 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 DNAJC5GQ8N7S2 189 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF564Q8TBZ8 553 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 UBLCP1Q8WVY7 318 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 DHX38Q92620 1227 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ALG3Q92685 438 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 KAT5Q92993 513 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 FMO2Q99518 471 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CGRRF1Q99675 332 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ACO2Q99798 780 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ABHD16BQ9H3Z7 469 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 FZD8Q9H461 694 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 TMBIM4Q9HC24 238 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 C1orf112Q9NSG2 853 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 RNF186Q9NXI6 227 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 GRIN2DO15399 1336 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 CNTNAP2Q9UHC6 1331 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ACKR2O00590 384 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SPOPO43791 374 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ZEB2O60315 1214 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 FAM189A1O60320 539 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 C22orf31O95567 290 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 PRKCBP05771 671 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 TNNI1P19237 187 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 PROZP22891 400 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ACOT2P49753 483 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 FMO1Q01740 532 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 MCL1Q07820 350 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 MESDQ14696 234 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 DPP9Q86TI2 863 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SLC47A2Q86VL8 602 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 TRIM11Q96F44 468 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 ZBTB45Q96K62 511 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 NUP85Q9BW27 656 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SLC5A4Q9NY91 659 aa12.35□□□□□ -0.43
PRPF40B-203ENST00000508736 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 EBAG9O00559 213 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 PODXLO00592 558 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 ABLIM1O14639 778 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 MMEP08473 750 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 COMTP21964 271 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 CTNNA2P26232 953 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 DRG2P55039 364 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 DUSP28Q4G0W2 176 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 AGBL2Q5U5Z8 902 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 IQSEC1Q6DN90 963 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 EFCAB12Q6NXP0 572 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 FOXR1Q6PIV2 292 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 TSHZ1Q6ZSZ6 1077 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF677Q86XU0 584 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 LRRC71Q8N4P6 559 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 LINC01465Q8N7H1 131 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 TINF2Q9BSI4 451 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 TRIM51Q9BSJ1 452 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 ANKFY1Q9P2R3 1169 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 MYO1CO00159 1063 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 OGTO15294 1046 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
PRPF40B-203ENST00000508736 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms