RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C2orf40Q9H1Z8 148 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 TRPV4Q9HBA0 871 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 PIAS3Q9Y6X2 628 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 ARNTLO00327 626 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 ACKR2O00590 384 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 PRRG1O14668 218 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 GIPC1O14908 333 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 PRKCBP05771 671 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 XBP1P17861 261 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 IGFBP6P24592 240 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 HOXA6P31267 233 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 CCR2P41597 374 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 CLCNKBP51801 687 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF252P-AS1Q0IIN9 211 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 PTGDRQ13258 359 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 DCAF4L1Q3SXM0 396 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 STPG1Q5TH74 334 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 PDZD4Q76G19 769 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 LONP2Q86WA8 852 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 MFSD6LQ8IWD5 586 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 LSM14BQ9BX40 385 aaKnown RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 CCDC113Q9H0I3 377 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 TTC12Q9H892 705 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 GPRC5CQ9NQ84 441 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 INSL5Q9Y5Q6 135 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 LAMA1P25391 3075 aa10.34□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF638Q14966 1978 aaKnown RBP10.34□□□□□ -0.75
NEDD9-211ENST00000508546 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 DENND4CQ5VZ89 1909 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 NUP205Q92621 2012 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 CHURC1-FNTBB4DL54 471 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 K7ESF4 209 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 ZNF263O14978 683 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 SYN3O14994 580 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 CDKL5O76039 1030 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 CCNE1P24864 410 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 BRCC3P46736 316 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 FNTBP49356 437 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 EPHA5P54756 1037 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
NEDD9-211ENST00000508546 LRRC32Q14392 662 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 EARS2Q5JPH6 523 aaKnown RBP10.33□□□□□ -0.76
NEDD9-211ENST00000508546 CYP4A22Q5TCH4 519 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 EEF1DP3Q658K8 133 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 ELMOD1Q8N336 334 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-211ENST00000508546 E2F7Q96AV8 911 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 ZSWIM3Q96MP5 696 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 BBC3Q96PG8 261 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-211ENST00000508546 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 MAFFQ9ULX9 164 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 GDAQ9Y2T3 454 aa10.33□□□□□ -0.76
NEDD9-211ENST00000508546 MYH11P35749 1972 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 H7C4K7 107 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 I3L4J1 428 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 MOSPD3O75425 235 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 SEC24AO95486 1093 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 EDN1P05305 212 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 VIPR2P41587 438 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 NAMPTP43490 491 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 NOVA1P51513 510 aaKnown RBP10.32□□□□□ -0.76
NEDD9-211ENST00000508546 STK3Q13188 491 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 CALCRLQ16602 461 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 XKR4Q5GH76 650 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 GLRA4Q5JXX5 417 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 DGKKQ5KSL6 1271 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 IQCEQ6IPM2 695 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 WDR5BQ86VZ2 330 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 C12orf50Q8NA57 414 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-211ENST00000508546 ZSCAN18Q8TBC5 510 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-211ENST00000508546 ADAM32Q8TC27 787 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 LOXL4Q96JB6 756 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 SCNM1Q9BWG6 230 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 GPR88Q9GZN0 384 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 C8orf33Q9H7E9 229 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-211ENST00000508546 GOLGA2P5Q9HBQ8 144 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 TUFT1Q9NNX1 390 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 NCANO14594 1321 aa10.32□□□□□ -0.76
NEDD9-211ENST00000508546 A0A087WWV3 80 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 HEPACAM2A8MVW5 462 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 CHADO15335 359 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
NEDD9-211ENST00000508546 REC8O95072 547 aa10.31□□□□□ -0.76
NEDD9-211ENST00000508546 ZNF806P0C7X5 589 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms