RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FHOD3Q2V2M9 1422 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ABCA5Q8WWZ7 1642 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 TTLL8A6PVC2 850 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ATXN7O15265 892 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 SCGB1D1O95968 90 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MCM5P33992 734 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 KRT2P35908 639 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 IL15P40933 162 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF41P51814 821 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 HADHBP55084 474 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ACTR1AP61163 376 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 VAMP2P63027 116 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 OCRLQ01968 901 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 C19orf57Q0VDD7 668 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 CETN1Q12798 172 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 AGERQ15109 404 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 UAP1L1Q3KQV9 507 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 GPR149Q86SP6 731 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 DDX53Q86TM3 631 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 TGFBRAP1Q8WUH2 860 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 PRAM1Q96QH2 718 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MMRN2Q9H8L6 949 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 RAB6BQ9NRW1 208 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 IL1RAPL1Q9NZN1 696 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 SUCLA2Q9P2R7 463 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MALT1Q9UDY8 824 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 FETUBQ9UGM5 382 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MROH5Q6ZUA9 1318 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 GPR89AB7ZAQ6 455 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 VWA5AO00534 786 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 SH2B2O14492 632 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 PSMA7O14818 248 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 POLR2MP0CAP2 368 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 GPR89BP0CG08 455 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 CYP11B2P19099 503 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 BMP6P22004 513 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 RABIFP47224 123 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 KCNJ10P78508 379 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 DBX2Q6ZNG2 339 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 R3HCC1LQ7Z5L2 792 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MFSD2AQ8NA29 543 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM76AQ8TAV0 307 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC5A11Q8WWX8 675 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 RIN2Q8WYP3 895 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ANKRD7Q92527 254 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM120BQ96EK7 910 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 TCF12Q99081 682 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 UQCC2Q9BRT2 126 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 FUT8Q9BYC5 575 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 MTMR12Q9C0I1 747 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 FBXO40Q9UH90 709 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 PCDHA11Q9Y5I1 949 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 NPFFR2Q9Y5X5 522 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 KCNMB2Q9Y691 235 aa8.05□□□□□ -1.12
PDGFRA-206ENST00000508170 CAPN14A8MX76 684 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 F8W8V4 182 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 STMND1H3BQB6 276 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 H7BY64 318 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 BCAS2O75934 225 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 SEC24BO95487 1268 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 SERPINC1P01008 464 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 CSF1P09603 554 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 JAK1P23458 1154 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 EEF1GP26641 437 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 CCT4P50991 539 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 TRAF1Q13077 416 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 NTRK3Q16288 839 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF827Q17R98 1081 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 XKR9Q5GH70 373 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 MARK2Q7KZI7 788 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 CDH26Q8IXH8 852 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 COA7Q96BR5 231 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 NAP1L3Q99457 506 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 CGRRF1Q99675 332 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 LIN7BQ9HAP6 207 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 SERINC1Q9NRX5 453 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 GJB4Q9NTQ9 266 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 ETAA1Q9NY74 926 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC39A10Q9ULF5 831 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 CCPG1Q9ULG6 757 aa8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF608Q9ULD9 1512 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CDK2AP1O14519 115 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 DLX3O60479 287 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ALDH1A2O94788 518 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PLGP00747 810 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ACTN1P12814 892 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 RHOQP17081 205 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms