RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 M0QZQ0 153 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 STK25O00506 426 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 CFHP08603 1231 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 CXCL8P10145 99 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 GAP43P17677 238 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 YWHAHQ04917 246 aaPredicted RBP15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 PLD1Q13393 1074 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 MCM6Q14566 821 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 ZBTB6Q15916 424 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 IQCEQ6IPM2 695 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 RSPO2Q6UXX9 243 aaPredicted RBP15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 USP37Q86T82 979 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 CCDC105Q8IYK2 499 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 RSAD2Q8WXG1 361 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 C18orf25Q96B23 403 aaPredicted RBP15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 MSTO1Q9BUK6 570 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 ASB7Q9H672 318 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 ARHGEF3Q9NR81 526 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 EXOC7Q9UPT5 735 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 OR6C75A6NL08 312 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 I3L4J1 428 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 NARSO43776 548 aaKnown RBP15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 OAZ2O95190 189 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 NPR3P17342 541 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 TYMPP19971 482 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 SYT1P21579 422 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.19e-6■□□□□ 8.7
HMGCS1-203ENST00000507004 PRKCQQ04759 706 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 ALCAMQ13740 583 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 PTPAQ15257 358 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 CYP4A22Q5TCH4 519 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 RRAGBQ5VZM2 374 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 CYP4F11Q9HBI6 524 aa15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 DNMT3BQ9UBC3 853 aaKnown RBP15.68■□□□□ 0.1
HMGCS1-203ENST00000507004 H0Y858 1186 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 ECI2O75521 394 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 RHOP08100 348 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 CPB1P15086 417 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 NBL1P41271 181 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 SV2BQ7L1I2 683 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 NPAS3Q8IXF0 933 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 DTWD2Q8NBA8 298 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 GPR152Q8TDT2 470 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 BORCS6Q96GS4 357 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 GPR88Q9GZN0 384 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 TUBGCP4Q9UGJ1 667 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 CPSF3Q9UKF6 684 aaKnown RBP15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 DSEQ9UL01 958 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 C2CD2Q9Y426 696 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 INSL5Q9Y5Q6 135 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 STYXL1Q9Y6J8 313 aa15.67■□□□□ 0.1
HMGCS1-203ENST00000507004 PDCD11Q14690 1871 aaKnown RBP15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 LACTBL1A8MY62 500 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 MEFVO15553 781 aaPredicted RBP15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 FAM189A1O60320 539 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 MAGEA9P43362 315 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 ARPP19P56211 112 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 STARD6P59095 220 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 NTHL1P78549 312 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 RESTQ13127 1097 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 MYBPC2Q14324 1141 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 ENOX2Q16206 610 aaKnown RBP15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 SEZ6Q53EL9 994 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 ADALQ6DHV7 355 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 PDZD4Q76G19 769 aaPredicted RBP15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 ZNF720Q7Z2F6 126 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 FGF14Q92915 247 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 FIZ1Q96SL8 496 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 OSBPL6Q9BZF3 934 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 SEMA4AQ9H3S1 761 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 TBC1D17Q9HA65 648 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 HSFX1Q9UBD0 423 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 CA14Q9ULX7 337 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
HMGCS1-203ENST00000507004 TRIOO75962 3097 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 KRBA1A5PL33 1030 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 K7ELQ4 463 aaPredicted RBP15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 GFRA3O60609 400 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 LDHAP00338 332 aaKnown RBP15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 ODC1P11926 461 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 IGFBP6P24592 240 aaPredicted RBP15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 GRIN1Q05586 938 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 SMARCB1Q12824 385 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 TMEM132DQ14C87 1099 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 SLC39A14Q15043 492 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 ARMCX5Q6P1M9 558 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms