RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PPP2R3AQ06190 1150 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
CLCN3-205ENST00000506924 SLC39A14Q15043 492 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 KARSQ15046 597 aaKnown RBP10.49□□□□□ -0.73
CLCN3-205ENST00000506924 USP38Q8NB14 1042 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 RNF149Q8NC42 400 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 TCP11Q8WWU5 503 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 TIFAQ96CG3 184 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 SLC9A7Q96T83 725 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 PANK2Q9BZ23 570 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-205ENST00000506924 MINDY3Q9H8M7 445 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 CERS4Q9HA82 394 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 MSRAQ9UJ68 235 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 DNM3Q9UQ16 869 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 DENND3A2RUS2 1198 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 SPTLC2O15270 562 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 EFCAB14O75071 495 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 EYA4O95677 639 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 CA3P07451 260 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 CYP11B2P19099 503 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 PLCG1P19174 1290 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 NCLP19338 710 aaKnown RBP10.48□□□□□ -0.73
CLCN3-205ENST00000506924 GLRA2P23416 452 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 CD68P34810 354 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-205ENST00000506924 ARL2P36404 184 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 NASPP49321 788 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-205ENST00000506924 CAPSQ13938 189 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 TMEM119Q4V9L6 283 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 SPRED2Q7Z698 418 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 EXOC8Q8IYI6 725 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 LINC00301Q8NCQ3 95 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 PHOSPHO2Q8TCD6 241 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 CALML4Q96GE6 196 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 AK8Q96MA6 479 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 ADAM2Q99965 735 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 RUSC1Q9BVN2 902 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 TTYH1Q9H313 450 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-205ENST00000506924 IFT122Q9HBG6 1241 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 SRPRBQ9Y5M8 271 aaKnown RBP10.48□□□□□ -0.73
CLCN3-205ENST00000506924 SQORQ9Y6N5 450 aa10.48□□□□□ -0.73
CLCN3-205ENST00000506924 LRRIQ4A6NIV6 560 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
CLCN3-205ENST00000506924 GJB5O95377 273 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 LIG1P18858 919 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 MUTP22033 750 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 GATMP50440 423 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 NRG1Q02297 640 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-205ENST00000506924 RAB30Q15771 203 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 LONRF3Q496Y0 759 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 HYIQ5T013 277 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 RINT1Q6NUQ1 792 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 TXNDC11Q6PKC3 985 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 SV2BQ7L1I2 683 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 CATSPER4Q7RTX7 472 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 ZNF410Q86VK4 478 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 RNF169Q8NCN4 708 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 GALNT11Q8NCW6 608 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 TOP1MTQ969P6 601 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-205ENST00000506924 KIFC3Q9BVG8 833 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 PCDHA11Q9Y5I1 949 aa10.47□□□□□ -0.73
CLCN3-205ENST00000506924 C9orf172C9J069 976 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 INO80B-WBP1J3KQ70 363 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 ASAP2O43150 1006 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 HIP1RO75146 1068 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 CYP11A1P05108 521 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 SFPQP23246 707 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 SLC12A3P55017 1021 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 CDC42EP1Q00587 391 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 TFDP1Q14186 410 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 ODR4Q5SWX8 454 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 C1orf186Q6ZWK4 172 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 PDILTQ8N807 584 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 KLHDC7BQ96G42 594 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 CPB2Q96IY4 423 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 YME1L1Q96TA2 773 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 RAD9AQ99638 391 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 FTHL17Q9BXU8 183 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 INO80BQ9C086 356 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 SEMA6BQ9H3T3 888 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 SLC28A3Q9HAS3 691 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 RGS18Q9NS28 235 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.73
CLCN3-205ENST00000506924 PIN4Q9Y237 131 aaKnown RBP10.46□□□□□ -0.73
CLCN3-205ENST00000506924 A0A087X0B3 334 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 RFXAPO00287 272 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 B4GALT5O43286 388 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms