RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-210ENST00000506767 ZACNQ401N2 412 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 SV2AQ7L0J3 742 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 DDX53Q86TM3 631 aaKnown RBP13.87□□□□□ -0.19
TCOF1-210ENST00000506767 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 SAMSN1Q9NSI8 373 aaKnown RBP13.87□□□□□ -0.19
TCOF1-210ENST00000506767 COL4A4P53420 1690 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-210ENST00000506767 GRM6O15303 877 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 TADA2AO75478 443 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CAVIN2O95810 425 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 PAX3P23760 479 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 DNAJB1P25685 340 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 ZNF165P49910 485 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 LILRA4P59901 499 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 RBP5P82980 135 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 MYL5Q02045 173 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 KRT17Q04695 432 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CAMK1Q14012 370 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 GRIN2CQ14957 1233 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 IQCB1Q15051 598 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CDKAL1Q5VV42 579 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 TDRD10Q5VZ19 366 aaKnown RBP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 LRRC52Q8N7C0 313 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 POF1BQ8WVV4 589 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 GPR62Q9BZJ7 368 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 HSD3B7Q9H2F3 369 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 TMEM8AQ9HCN3 771 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
TCOF1-210ENST00000506767 STK39Q9UEW8 545 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 AGAP1Q9UPQ3 857 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 COL6A3P12111 3177 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 SCN1AP35498 2009 aa13.86□□□□□ -0.19
TCOF1-210ENST00000506767 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 RFXAPO00287 272 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-210ENST00000506767 SPTLC1O15269 473 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 PMM2O15305 246 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 STX10O60499 249 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 VNN1O95497 513 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 SOD2P04179 222 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
TCOF1-210ENST00000506767 BRCC3P46736 316 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 GCLMP48507 274 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 ZNF445P59923 1031 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 KRT39Q6A163 491 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 TAS1R1Q7RTX1 841 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 AOPEPQ8N6M6 819 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 LMAN2LQ9H0V9 348 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
TCOF1-210ENST00000506767 PUF60Q9UHX1 559 aaKnown RBP13.85□□□□□ -0.19
TCOF1-210ENST00000506767 SF3B1O75533 1304 aaKnown RBP eCLIP13.85□□□□□ -0.19
TCOF1-210ENST00000506767 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 SMTNL1A8MU46 457 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 M0QZQ0 153 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 FSCN2O14926 492 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 TRAPPC3O43617 180 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 STAU1O95793 577 aaKnown RBP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 KRT19P08727 400 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 ZNF18P17022 549 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 POU3F3P20264 500 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 PNPLA4P41247 253 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 TAF6P49848 677 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 ERVFC1P60507 584 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 ELAVL2Q12926 359 aaKnown RBP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 CBWD6Q4V339 395 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 DCAF17Q5H9S7 520 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 CBWD3Q5JTY5 395 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 CBWD5Q5RIA9 395 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 TCERG1LQ5VWI1 586 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 ZNF560Q96MR9 790 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 HERC2P3Q9BVR0 1158 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 VRTNQ9H8Y1 702 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 COQ4Q9Y3A0 265 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
TCOF1-210ENST00000506767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.84□□□□□ -0.19
TCOF1-210ENST00000506767 KPNA7A9QM74 516 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 KCNJ18B7U540 433 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 DLL1O00548 723 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 CTSAP10619 480 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms