RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
SNCA-209ENST00000506244 SUSD3Q96L08 255 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 GRXCR2A6NFK2 248 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 H7C4K7 107 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 PDXKO00764 312 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 BMP1P13497 986 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 TKTP29401 623 aaKnown RBP18.06■□□□□ 0.48
SNCA-209ENST00000506244 CYP2J2P51589 502 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 ITIH3Q06033 890 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 PNOCQ13519 176 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 SNRNP35Q16560 246 aaKnown RBP18.06■□□□□ 0.48
SNCA-209ENST00000506244 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 FBXL18Q96ME1 805 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 IPO9Q96P70 1041 aaKnown RBP18.06■□□□□ 0.48
SNCA-209ENST00000506244 GSDMAQ96QA5 445 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 SFXN1Q9H9B4 322 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 VWA8A3KMH1 1905 aa18.06■□□□□ 0.48
SNCA-209ENST00000506244 TULP1O00294 542 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 MBTPS2O43462 519 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 CALUO43852 315 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 TMEM191BP0C7N4 346 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 EPCAMP16422 314 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 PNPLA4P41247 253 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 GUCY2FP51841 1108 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 RBM10P98175 930 aaKnown RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 TFAMQ00059 246 aaKnown RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 SMAD2Q15796 467 aaKnown RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 C9orf57Q5W0N0 161 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 ZNF280DQ6N043 979 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 CES5AQ6NT32 575 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 PRSS55Q6UWB4 352 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 CD300LGQ6UXG3 332 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 CBWD2Q8IUF1 395 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 EFCAB13Q8IY85 973 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 GUF1Q8N442 669 aaKnown RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 LNX1Q8TBB1 728 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 HDAC7Q8WUI4 952 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 TMEM174Q8WUU8 243 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 ANKRD36BP1Q96IX9 119 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 UHRF1Q96T88 793 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 OXCT2Q9BYC2 517 aaPredicted RBP18.05■□□□□ 0.48
SNCA-209ENST00000506244 PRKAG3Q9UGI9 489 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 BACE2Q9Y5Z0 518 aa18.05■□□□□ 0.48
SNCA-209ENST00000506244 ANO9A1A5B4 782 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 I3L4J1 428 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 M0QZQ0 153 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 CLIC2O15247 247 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 EXOC3O60645 756 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 ODC1P11926 461 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 AARSP49588 968 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNCA-209ENST00000506244 VARS2Q5ST30 1063 aaKnown RBP18.04■□□□□ 0.48
SNCA-209ENST00000506244 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 WDR49Q8IV35 697 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 SLC9A9Q8IVB4 645 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 ZSWIM2Q8NEG5 633 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 FNBP1Q96RU3 617 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 POP1Q99575 1024 aaKnown RBP18.04■□□□□ 0.48
SNCA-209ENST00000506244 KCTD10Q9H3F6 313 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 PLEKHA4Q9H4M7 779 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 PDE11AQ9HCR9 933 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 MAN1C1Q9NR34 630 aa18.04■□□□□ 0.48
SNCA-209ENST00000506244 R3HCC1Q9Y3T6 440 aaKnown RBP18.04■□□□□ 0.48
SNCA-209ENST00000506244 USP15Q9Y4E8 981 aaPredicted RBP18.04■□□□□ 0.48
SNCA-209ENST00000506244 GADD45BO75293 160 aaPredicted RBP18.03■□□□□ 0.48
SNCA-209ENST00000506244 TNNC2P02585 160 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 IL9P15248 144 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 RPL17P18621 184 aaKnown RBP18.03■□□□□ 0.48
SNCA-209ENST00000506244 TAF6P49848 677 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 MYBPC2Q14324 1141 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 SV2CQ496J9 727 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 USP37Q86T82 979 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 RIPOR3Q96MK2 946 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 NECTIN4Q96NY8 510 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 CLSTN3Q9BQT9 956 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 ADAM7Q9H2U9 754 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 TRAF3IP3Q9Y228 551 aa18.03■□□□□ 0.48
SNCA-209ENST00000506244 PIRO00625 290 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 TGM5O43548 720 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 NR3C1P04150 777 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 TYMPP19971 482 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 PLXNA3P51805 1871 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 LILRA4P59901 499 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 YWHAHQ04917 246 aaPredicted RBP18.02■□□□□ 0.48
SNCA-209ENST00000506244 CYP24A1Q07973 514 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 PSMD6Q15008 389 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 NFIL3Q16649 462 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 LIN9Q5TKA1 542 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.48
SNCA-209ENST00000506244 SYCE2Q6PIF2 218 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 GLYCTKQ8IVS8 523 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 LRRC52Q8N7C0 313 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 SPATA20Q8TB22 786 aa18.02■□□□□ 0.48
SNCA-209ENST00000506244 GBP4Q96PP9 640 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms