RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PRR5-ARHGAP8B1AHC4 643 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 DPYSL4O14531 572 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 SLC16A4O15374 487 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 TBC1D4O60343 1298 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 HIP1RO75146 1068 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 OR4Q2P0C623 313 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 RPA1P27694 616 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 FNTBP49356 437 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 RBM25P49756 843 aaKnown RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 NRLP54845 237 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 ARHGAP8P85298 464 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 SPAG1Q07617 926 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 STRN3Q13033 797 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 DMP1Q13316 513 aaPredicted RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 TEAD2Q15562 447 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 NAB2Q15742 525 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 ZNF280DQ6N043 979 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 TTC16Q8NEE8 873 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 KIFAP3Q92845 792 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 ZSWIM3Q96MP5 696 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 MRPL4Q9BYD3 311 aaKnown RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 CDT1Q9H211 546 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 ASAH2Q9NR71 780 aa9.03□□□□□ -0.96
SNF8-204ENST00000506104 NOL7Q9UMY1 257 aaKnown RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 TIMM13Q9Y5L4 95 aaPredicted RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 HEPACAM2A8MVW5 462 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 E9PMD0 336 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 TMEM189-UBE2V1I3L0A0 370 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 RIOK3O14730 519 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 EPB41L2O43491 1005 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 ATF2P15336 505 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 PSMC3P17980 439 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 GRM5P41594 1212 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 CCR2P41597 374 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 RPS9P46781 194 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 CXCL12P48061 93 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SOX9P48436 509 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 CCR3P51677 355 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SATB1Q01826 763 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SRSF5Q13243 272 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 CD300LGQ6UXG3 332 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 VITQ6UXI7 678 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 DSTYKQ6XUX3 929 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 USP37Q86T82 979 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 CCDC83Q8IWF9 413 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 TMEM130Q8N3G9 435 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 ZBTB44Q8NCP5 570 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 APPL2Q8NEU8 664 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 DNASE1L2Q92874 299 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SMARCD2Q92925 531 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 CLDN23Q96B33 292 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 ZBTB45Q96K62 511 aaPredicted RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 TBC1D32Q96NH3 1257 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 PLIN2Q99541 437 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 ACO2Q99798 780 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 RTKNQ9BST9 563 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 ZNF334Q9HCZ1 680 aaPredicted RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 PARD6AQ9NPB6 346 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 RBM12Q9NTZ6 932 aaKnown RBP9.02□□□□□ -0.97
SNF8-204ENST00000506104 TNFSF13BQ9Y275 285 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 CEP250Q9BV73 2442 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 PHLPP2Q6ZVD8 1323 aa9.02□□□□□ -0.97
SNF8-204ENST00000506104 SPTBN2O15020 2390 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 A0A1W2PRU2 124 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 ARHGEF37A1IGU5 675 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 PP2D1A8MPX8 630 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 NRG2O14511 850 aaPredicted RBP9.01□□□□□ -0.97
SNF8-204ENST00000506104 SYN3O14994 580 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 ABLIM3O94929 683 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 PAPLNO95428 1278 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 NEFLP07196 543 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 POU2F2P09086 479 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 FCARP24071 287 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 NPTX2P47972 431 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 EPHB3P54753 998 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 LRRC32Q14392 662 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 CCDC6Q16204 474 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 TAF12Q16514 161 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 ECM1Q16610 540 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 AASDHQ4L235 1098 aaPredicted RBP9.01□□□□□ -0.97
SNF8-204ENST00000506104 PPM1JQ5JR12 505 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 PRSS36Q5K4E3 855 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 KRT79Q5XKE5 535 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 LAIR1Q6GTX8 287 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 MPZL3Q6UWV2 235 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 RTL10Q7L3V2 364 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 TCEAL8Q8IYN2 117 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 DDX12PQ92771 950 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 ZFYVE19Q96K21 471 aa9.01□□□□□ -0.97
SNF8-204ENST00000506104 ZMAT2Q96NC0 199 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms