RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 VNN1O95497 513 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 C4BPAP04003 597 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 BRAFP15056 766 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 GNA15P30679 374 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 MAN1A1P33908 653 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 RDXP35241 583 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 POLGP54098 1239 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CENPCQ03188 943 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 MAMLD1Q13495 774 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ITIH4Q14624 930 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SNCBQ16143 134 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZACNQ401N2 412 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATP13A4Q4VNC1 1196 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 HP1BP3Q5SSJ5 553 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZBTB41Q5SVQ8 909 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 LIN9Q5TKA1 542 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 C15orf39Q6ZRI6 1047 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 MON1BQ7L1V2 547 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 TRPM8Q7Z2W7 1104 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ANKS1BQ7Z6G8 1248 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CEP57Q86XR8 500 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF677Q86XU0 584 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 RHOT1Q8IXI2 618 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 RDM1Q8NG50 284 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 GPRASP2Q96D09 838 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SGSM3Q96HU1 749 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZBED3Q96IU2 234 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 C9orf72Q96LT7 481 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SENP7Q9BQF6 1050 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 NSRP1Q9H0G5 558 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ARHGAP28Q9P2N2 729 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 PI4K2BG5E9Z4 385 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 K7ERI5 159 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 HGSO14964 777 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CHUKO15111 745 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 TLR3O15455 904 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 MAFGO15525 162 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CYP1A1P04798 512 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 FDX1P10109 184 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 KRT10P13645 584 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 KCNA3P22001 575 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATP5DP30049 168 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 XRCC4Q13426 336 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CUL2Q13617 745 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 MPP2Q14168 576 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 PSMD6Q15008 389 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 PRAMEF18Q5VWM3 479 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SCARA3Q6AZY7 606 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 HIBCHQ6NVY1 386 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 VSTM1Q6UX27 236 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SYDE1Q6ZW31 735 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 SRRM1Q8IYB3 904 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 OSBPL8Q9BZF1 889 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 HAPLN2Q9GZV7 340 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 CCDC134Q9H6E4 229 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 APOBEC3GQ9HC16 384 aaKnown RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 KIAA1586Q9HCI6 787 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ABCF3Q9NUQ8 709 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 RBAKQ9NYW8 714 aaPredicted RBP8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 NINJ2Q9NZG7 142 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF541Q9H0D2 1346 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.111e-8■■■■■ 38.6
PPARGC1A-204ENST00000506055 POTEJP0CG39 1038 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 GHRP10912 638 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CETPP11597 493 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATF7P17544 494 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 HMGCS2P54868 508 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 RPL7AP62424 266 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 SP2Q02086 613 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CAV1Q03135 178 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 KLF1Q13351 362 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TNFAIP1Q13829 316 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 EMC2Q15006 297 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZKSCAN8Q15776 578 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CCNG2Q16589 344 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 P3H1Q32P28 736 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 NBPF12Q5TAG4 269 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 IZUMO3Q5VZ72 239 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CIAPIN1Q6FI81 312 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CYP4F22Q6NT55 531 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CRELD2Q6UXH1 353 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ABHD15Q6UXT9 468 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TBC1D1Q86TI0 1168 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 CCDC89Q8N998 374 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 MSTO1Q9BUK6 570 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 TARS2Q9BW92 718 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 MRPL47Q9HD33 250 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 FBXO40Q9UH90 709 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 NAALADL1Q9UQQ1 740 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNFX1Q9P2E3 1918 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 UMODL1Q5DID0 1318 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 SNX3O60493 162 aa8.09□□□□□ -1.11
PPARGC1A-204ENST00000506055 DNAJC8O75937 253 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms