RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 C5orf42Q9H799 3197 aa22.39■■□□□ 1.18
DDR1-255ENST00000504927 CLIC2O15247 247 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 IGFBP6P24592 240 aaPredicted RBP22.39■■□□□ 1.17
DDR1-255ENST00000504927 ANKRD54Q6NXT1 300 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 LLGL2Q6P1M3 1020 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 ANKS3Q6ZW76 656 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 SPATA20Q8TB22 786 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 LNX1Q8TBB1 728 aaPredicted RBP22.39■■□□□ 1.17
DDR1-255ENST00000504927 SUSD3Q96L08 255 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 KCTD10Q9H3F6 313 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 DZANK1Q9NVP4 752 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 DPP3Q9NY33 737 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 BARX2Q9UMQ3 279 aaPredicted RBP22.39■■□□□ 1.17
DDR1-255ENST00000504927 TRIP11Q15643 1979 aa22.39■■□□□ 1.17
DDR1-255ENST00000504927 NCOR1O75376 2440 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 GRXCR2A6NFK2 248 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 PIRO00625 290 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 PRPF40AO75400 957 aaKnown RBP22.38■■□□□ 1.17
DDR1-255ENST00000504927 MCM4P33991 863 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 BRCC3P46736 316 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 CLCN4P51793 760 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 MYBPC2Q14324 1141 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 SNRNP35Q16560 246 aaKnown RBP22.38■■□□□ 1.17
DDR1-255ENST00000504927 PTCRAQ6ISU1 281 aaPredicted RBP22.38■■□□□ 1.17
DDR1-255ENST00000504927 ELMSAN1Q6PJG2 1045 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 GUF1Q8N442 669 aaKnown RBP22.38■■□□□ 1.17
DDR1-255ENST00000504927 APPL2Q8NEU8 664 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 SMARCE1Q969G3 411 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
DDR1-255ENST00000504927 ANO9A1A5B4 782 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 CALUO43852 315 aaPredicted RBP22.37■■□□□ 1.17
DDR1-255ENST00000504927 CYP2J2P51589 502 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 SMAD4Q13485 552 aaKnown RBP22.37■■□□□ 1.17
DDR1-255ENST00000504927 PSMD5Q16401 504 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 C9orf57Q5W0N0 161 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 CBWD2Q8IUF1 395 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 SLC9A9Q8IVB4 645 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 SMRP1Q8NCR6 262 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 HDAC7Q8WUI4 952 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 NECAB3Q96P71 396 aaPredicted RBP22.37■■□□□ 1.17
DDR1-255ENST00000504927 TRAF3IP3Q9Y228 551 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 PCDHA5Q9Y5H7 936 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 BACE2Q9Y5Z0 518 aa22.37■■□□□ 1.17
DDR1-255ENST00000504927 ARHGEF37A1IGU5 675 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 H7C4K7 107 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 M0QZQ0 153 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 TULP1O00294 542 aaPredicted RBP22.36■■□□□ 1.17
DDR1-255ENST00000504927 EXOC3O60645 756 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 GLUD1P00367 558 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 TKTP29401 623 aaKnown RBP22.36■■□□□ 1.17
DDR1-255ENST00000504927 AARSP49588 968 aaKnown RBP eCLIP22.36■■□□□ 1.17
DDR1-255ENST00000504927 GUCY2FP51841 1108 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 LILRA4P59901 499 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 RBM10P98175 930 aaKnown RBP22.36■■□□□ 1.17
DDR1-255ENST00000504927 TFAMQ00059 246 aaKnown RBP22.36■■□□□ 1.17
DDR1-255ENST00000504927 PRSS55Q6UWB4 352 aaPredicted RBP22.36■■□□□ 1.17
DDR1-255ENST00000504927 EFCAB13Q8IY85 973 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 RDH13Q8NBN7 331 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 PDE11AQ9HCR9 933 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 DMAC2Q9NW81 257 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 PCDHB8Q9UN66 801 aa22.36■■□□□ 1.17
DDR1-255ENST00000504927 I3L4J1 428 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 EPCAMP16422 314 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 ITIH3Q06033 890 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 NFIL3Q16649 462 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 DUOXA2Q1HG44 320 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 COBLL1Q53SF7 1204 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 ZNF658Q5TYW1 1059 aaPredicted RBP22.35■■□□□ 1.17
DDR1-255ENST00000504927 ADAMTS19Q8TE59 1207 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 MFSD14AQ96MC6 490 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 FNBP1Q96RU3 617 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 CLSTN3Q9BQT9 956 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 OXCT2Q9BYC2 517 aaPredicted RBP22.35■■□□□ 1.17
DDR1-255ENST00000504927 PLEKHA4Q9H4M7 779 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 MTRRQ9UBK8 725 aa22.35■■□□□ 1.17
DDR1-255ENST00000504927 MBTPS2O43462 519 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 PNPLA4P41247 253 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 CYP24A1Q07973 514 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 MRPL58Q14197 206 aaKnown RBP22.34■■□□□ 1.17
DDR1-255ENST00000504927 PSMD6Q15008 389 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 SMAD2Q15796 467 aaKnown RBP22.34■■□□□ 1.17
DDR1-255ENST00000504927 CLUL1Q15846 466 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 VARS2Q5ST30 1063 aaKnown RBP22.34■■□□□ 1.17
DDR1-255ENST00000504927 LILRA6Q6PI73 481 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 SYCE2Q6PIF2 218 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 DSTYKQ6XUX3 929 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 WDR49Q8IV35 697 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 ANKRD36BP1Q96IX9 119 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 GBP4Q96PP9 640 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 S1PR5Q9H228 398 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 INTS13Q9NVM9 706 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 ITGA11Q9UKX5 1188 aa22.34■■□□□ 1.17
DDR1-255ENST00000504927 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
DDR1-255ENST00000504927 TGM5O43548 720 aa22.33■■□□□ 1.17
DDR1-255ENST00000504927 NR3C1P04150 777 aa22.33■■□□□ 1.17
DDR1-255ENST00000504927 TMEM191BP0C7N4 346 aa22.33■■□□□ 1.17
DDR1-255ENST00000504927 RPL17P18621 184 aaKnown RBP22.33■■□□□ 1.17
DDR1-255ENST00000504927 RPL13P26373 211 aaKnown RBP22.33■■□□□ 1.17
DDR1-255ENST00000504927 WNT7BP56706 349 aa22.33■■□□□ 1.17
DDR1-255ENST00000504927 RAB33AQ14088 237 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms