RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 YAF2Q8IY57 180 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 FAM177A1Q8N128 213 aaPredicted RBP7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF687Q8N1G0 1237 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 ELMOD1Q8N336 334 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 FAM160A2Q8N612 972 aaPredicted RBP7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 CEP120Q8N960 986 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 MCPH1Q8NEM0 835 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF461Q8TAF7 563 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 TTC8Q8TAM2 541 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 FAM200AQ8TCP9 573 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 CSGALNACT1Q8TDX6 532 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 DEPDC1BQ8WUY9 529 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 SMARCD2Q92925 531 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 ZSWIM3Q96MP5 696 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 PPP1R10Q96QC0 940 aaKnown RBP7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 HSD17B14Q9BPX1 270 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 C2orf40Q9H1Z8 148 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 FZD8Q9H461 694 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 POLD4Q9HCU8 107 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 BRMS1Q9HCU9 246 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
NPIPB3-203ENST00000504841 DNAH14Q0VDD8 3507 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 HEPACAM2A8MVW5 462 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 H7C4K7 107 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ACKR2O00590 384 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 PODXLO00592 558 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 WNT7AO00755 349 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 AXIN1O15169 862 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 NEMFO60524 1076 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 LRP3O75074 770 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 PPP1R37O75864 691 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 REC8O95072 547 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 CPB1P15086 417 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 MCM4P33991 863 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 NAMPTP43490 491 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 SOX4Q06945 474 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 PTGDRQ13258 359 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 UPP1Q16831 310 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF568Q3ZCX4 644 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 CTXN3Q4LDR2 81 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ATF7IP2Q5U623 682 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 SLC8B1Q6J4K2 584 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 RTL10Q7L3V2 364 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 LONP2Q86WA8 852 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 MAP4K3Q8IVH8 894 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 SPEM1Q8N4L4 309 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 DDX1Q92499 740 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF274Q96GC6 653 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF512Q96ME7 567 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 UROC1Q96N76 676 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 CCDC94Q9BW85 323 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ZSWIM6Q9HCJ5 1215 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ASAH2Q9NR71 780 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 PDRG1Q9NUG6 133 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 C2orf42Q9NWW7 574 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 ORC3Q9UBD5 711 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 FBXL5Q9UKA1 691 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 F5P12259 2224 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 CACNA1GO43497 2377 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 RALGAPA1Q6GYQ0 2036 aa7.57□□□□□ -1.2
NPIPB3-203ENST00000504841 STK36Q9NRP7 1315 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 SMIM28A0A1B0GU29 152 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 A0A1W2PRU2 124 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 K7ESF4 209 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 MOSPD3O75425 235 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 MED24O75448 989 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 ABLIM3O94929 683 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 SPATA31C1P0DKV0 1188 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 ATF2P15336 505 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 PMLP29590 882 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 CTHP32929 405 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 MCM7P33993 719 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 PXNP49023 591 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 RBM25P49756 843 aaKnown RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 PPP2R5AQ15172 486 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 STXBP5Q5T5C0 1151 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF280DQ6N043 979 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 CENPQQ7L2Z9 268 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 CATSPER3Q86XQ3 398 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 TCEAL8Q8IYN2 117 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 RSPRY1Q96DX4 576 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 ZFYVE19Q96K21 471 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 PGLYRP2Q96PD5 576 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 CDT1Q9H211 546 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 ARRDC1-AS1Q9H2J1 176 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 TMEM60Q9H2L4 133 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 SMOC1Q9H4F8 434 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 TUFT1Q9NNX1 390 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms