RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CAVIN2O95810 425 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 ASS1P00966 412 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 RPL13P26373 211 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PBX1P40424 430 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 FMO5P49326 533 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 VAMP7P51809 220 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 BCAR1P56945 870 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 LILRA4P59901 499 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PLCB3Q01970 1234 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PPP2R3AQ06190 1150 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 STIM1Q13586 685 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM132DQ14C87 1099 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KRT31Q15323 416 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PAN2Q504Q3 1202 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 HSP90AA4PQ58FG1 418 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 C9orf57Q5W0N0 161 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 CEP135Q66GS9 1140 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 AOPEPQ8N6M6 819 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 UBR7Q8N806 425 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 RNF169Q8NCN4 708 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TAS1R2Q8TE23 839 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 ELMO3Q96BJ8 720 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 IGSF21Q96ID5 467 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 LRCH3Q96II8 777 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 NAP1L5Q96NT1 182 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 RTP3Q9BQQ7 232 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM175Q9BSA9 504 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 GPR62Q9BZJ7 368 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 RBSNQ9H1K0 784 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 APOBEC3GQ9HC16 384 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 CHST7Q9NS84 486 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KANSL3Q9P2N6 904 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PARP2Q9UGN5 583 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 ARMCX3Q9UH62 379 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 DACH1Q9UI36 760 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 UBQLN1Q9UMX0 589 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 BRWD1Q9NSI6 2320 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 NOTCH4Q99466 2003 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 PATJQ8NI35 1801 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 A0A1B0GTH6 734 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 FSD2A1L4K1 749 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 CASTOR2A6NHX0 329 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 NT5C1B-RDH14C9J2C7 533 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 NOL4O94818 638 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 ITGB3P05106 788 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 DLATP10515 647 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 EEF1GP26641 437 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 GTF2H1P32780 548 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 BMPR1AP36894 532 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 GCLMP48507 274 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 APBA1Q02410 837 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KCNH2Q12809 1159 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KCNC3Q14003 757 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 MRPL58Q14197 206 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 BTG3Q14201 252 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 RSPO2Q6UXX9 243 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 COLGALT1Q8NBJ5 622 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KBTBD7Q8WVZ9 684 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 CCDC127Q96BQ5 260 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 YME1L1Q96TA2 773 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TUBGCP2Q9BSJ2 902 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 MRPL9Q9BYD2 267 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TTYH3Q9C0H2 523 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 METTL14Q9HCE5 456 aaKnown RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM8AQ9HCN3 771 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 GDAP2Q9NXN4 497 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 DPP3Q9NY33 737 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 AJAP1Q9UKB5 411 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-208ENST00000504788 INPP5FQ9Y2H2 1132 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 SIK3Q9Y2K2 1263 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 FRMD4BQ9Y2L6 1034 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 IRAK3Q9Y616 596 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 DOCK6Q96HP0 2047 aa5.34□□□□□ -1.56
LMNB1-208ENST00000504788 GTPBP10A4D1E9 387 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 KCNJ18B7U540 433 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 H3BNC9 293 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 GABRDO14764 452 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 FSCN2O14926 492 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 EPHB6O15197 1021 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 P4HA2O15460 535 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 TEX33O43247 280 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 VNN2O95498 520 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 GNA14O95837 355 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 CYP11A1P05108 521 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 HOXB1P14653 301 aaPredicted RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 POU3F3P20264 500 aaPredicted RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 FGFR3P22607 806 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 POLR2BP30876 1174 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 RPL9P32969 192 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 ASPAP45381 313 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 BRCC3P46736 316 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 AP3M2P53677 418 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 ERVFC1P60507 584 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 MYL6P60660 151 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms