RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 FAM161BQ96MY7 647 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 LMCD1Q9NZU5 365 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 ADAM28Q9UKQ2 775 aa12.88□□□□□ -0.35
PDLIM5-208ENST00000504489 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 F8W810 466 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PODXLO00592 558 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 TADA2AO75478 443 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 B3GAT3O94766 335 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 KIF4AO95239 1232 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 FGFR1OPO95684 399 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 EPB41P11171 864 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 TNNI1P19237 187 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PAX3P23760 479 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 AP3M2P53677 418 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 STX17P56962 302 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 TFAMQ00059 246 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 CAMK1Q14012 370 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 C9orf57Q5W0N0 161 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 USP37Q86T82 979 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 CSGALNACT2Q8N6G5 542 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 MRPL38Q96DV4 380 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 MED15Q96RN5 788 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
PDLIM5-208ENST00000504489 PIRO00625 290 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 IKBKBO14920 756 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 TNNC2P02585 160 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 DLATP10515 647 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 KRT13P13646 458 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 DNAJB1P25685 340 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 VAMP7P51809 220 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 STX1AQ16623 288 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 PTPROQ16827 1216 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 C3orf58Q8NDZ4 430 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 GPR62Q9BZJ7 368 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDLIM5-208ENST00000504489 REV3LO60673 3130 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 FSCN2O14926 492 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 GNA14O95837 355 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 SOD2P04179 222 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 ERVFC1P60507 584 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 DLG4P78352 724 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 TYRO3Q06418 890 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 BFSP1Q12934 665 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 LMBRD2Q68DH5 695 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 TRAPPC11Q7Z392 1133 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 GPR65Q8IYL9 337 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 TMEM130Q8N3G9 435 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 HERC2P3Q9BVR0 1158 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 NGRNQ9NPE2 291 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
PDLIM5-208ENST00000504489 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms