RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PTPRJQ12913 1337 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 ZSWIM8A7E2V4 1837 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 GOLGA6BA6NDN3 693 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MANSC4A6NHS7 340 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 H3BRB1 525 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MYO1FO00160 1098 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 RAD51CO43502 376 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 SPOPO43791 374 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PAEPP09466 180 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 P4HA1P13674 534 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 EIF4BP23588 611 aaKnown RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 CDH5P33151 784 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 WNT7BP56706 349 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 INHBEP58166 350 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 NOMO3P69849 1222 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 GUCY2DQ02846 1103 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MTMR3Q13615 1198 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 ACVR2BQ13705 512 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 AMHR2Q16671 573 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MAP1SQ66K74 1059 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 TMEM270Q6UE05 265 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 SND1Q7KZF4 910 aaKnown RBP eCLIP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 MON1BQ7L1V2 547 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 C12orf50Q8NA57 414 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 AFG1LQ8WV93 481 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 COPS5Q92905 334 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 ARID3AQ99856 593 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 CDT1Q9H211 546 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PLEKHA5Q9HAU0 1116 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 IFT122Q9HBG6 1241 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PARVAQ9NVD7 372 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 SMARCAL1Q9NZC9 954 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 PCYOX1Q9UHG3 505 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 FEZ2Q9UHY8 353 aaPredicted RBP10.46□□□□□ -0.73
COL1A1-210ENST00000504289 DERAQ9Y315 318 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 C2CD2Q9Y426 696 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 CEP83Q9Y592 693 aa10.46□□□□□ -0.73
COL1A1-210ENST00000504289 A6NJR5 290 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 GOLGA8KD6RF30 607 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 FSCN2O14926 492 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 MED7O43513 233 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 PSTPIP1O43586 416 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 HSF2BPO75031 334 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 PHF2O75151 1096 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 PROSCO94903 275 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ERLIN2O94905 339 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 MMP3P08254 477 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 MYBL2P10244 700 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 MMP8P22894 467 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
COL1A1-210ENST00000504289 HSPA9P38646 679 aaKnown RBP10.45□□□□□ -0.74
COL1A1-210ENST00000504289 CETN2P41208 172 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 FNTAP49354 379 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 DNA2P51530 1060 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 CLCN3P51790 818 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 SLC7A5Q01650 507 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 DMTNQ08495 405 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 MESDQ14696 234 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM132AQ24JP5 1023 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ZNF699Q32M78 642 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 DCAF4L1Q3SXM0 396 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 CFAP58Q5T655 872 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 LRRC38Q5VT99 294 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 DCAF12L1Q5VU92 463 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 LRIG3Q6UXM1 1119 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 SYDE1Q6ZW31 735 aaPredicted RBP10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ZBTB33Q86T24 672 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 KLHL7Q8IXQ5 586 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 IQCKQ8N0W5 287 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM35BQ8NCS4 154 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ZNF606Q8WXB4 792 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ALG3Q92685 438 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 NLRP4Q96MN2 994 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 SH3GL2Q99962 352 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ADPGKQ9BRR6 497 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 BCO2Q9BYV7 579 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 XYLT2Q9H1B5 865 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 LHX5Q9H2C1 402 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 GOLPH3Q9H4A6 298 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 KIAA1257Q9ULG3 409 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 STRIP2Q9ULQ0 834 aa10.45□□□□□ -0.74
COL1A1-210ENST00000504289 NRCAMQ92823 1304 aa10.44□□□□□ -0.74
COL1A1-210ENST00000504289 A0A1B0GUA9 196 aa10.44□□□□□ -0.74
COL1A1-210ENST00000504289 TTLL13PA6NNM8 815 aa10.44□□□□□ -0.74
COL1A1-210ENST00000504289 THAP12O43422 761 aa10.44□□□□□ -0.74
COL1A1-210ENST00000504289 ZMYND10O75800 440 aa10.44□□□□□ -0.74
COL1A1-210ENST00000504289 CELF2O95319 508 aaKnown RBP10.44□□□□□ -0.74
COL1A1-210ENST00000504289 CST3P01034 146 aaPredicted RBP10.44□□□□□ -0.74
COL1A1-210ENST00000504289 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms