RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 APRTP07741 180 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 OCA2Q04671 838 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 ABTB1Q969K4 478 aaPredicted RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 NDFIP2Q9NV92 336 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 SPAG6O75602 509 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 CD4P01730 458 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 CHN1P15882 459 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 RDM1Q8NG50 284 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 EXTL3O43909 919 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 KCNA1Q09470 495 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 PDIA6Q15084 440 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 ROPN1BQ9BZX4 212 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 ROPN1Q9HAT0 212 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 GRIK1P39086 918 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 KCNV2Q8TDN2 545 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 SLC26A7Q8TE54 656 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 OSBPL8Q9BZF1 889 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 XPO7Q9UIA9 1087 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 COMTP21964 271 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 RAD23BP54727 409 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 CUL3Q13618 768 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 HIC1Q14526 733 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 RBBP7Q16576 425 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 SZRD1Q7Z422 152 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 TRIM45Q9H8W5 580 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 RGS7P49802 495 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 PPP4CP60510 307 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 CENPCQ03188 943 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 RARS2Q5T160 578 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 MMGT1Q8N4V1 131 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 ZNF473Q8WTR7 871 aaKnown RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 SCHIP1Q9P0W5 487 aaPredicted RBP17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 MAD2L2Q9UI95 211 aa17.37■□□□□ 0.37
PCDHA1-203ENST00000504120 EIF3HO15372 352 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 TMED1Q13445 227 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ANO4Q32M45 955 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ACCSLQ4AC99 568 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 EFHBQ8N7U6 833 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 USP38Q8NB14 1042 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 GTF3C2Q8WUA4 911 aaPredicted RBP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 PAK5Q9P286 719 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 TAF6LQ9Y6J9 622 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 KCNA2P16389 499 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 PGM1P36871 562 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ACADSBP45954 432 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 RSAD1Q9HA92 442 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 KLC4Q9NSK0 619 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ZNF197O14709 1029 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 TNPO2O14787 897 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 RAD51CO43502 376 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 SLC25A27O95847 323 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ZNF200P98182 395 aaPredicted RBP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 LAMB3Q13751 1172 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ATXN7L3BQ96GX2 97 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 CLMNQ96JQ2 1002 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 RMDN2Q96LZ7 410 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 PPP1R2P1Q96PQ5 205 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 TSSK1BQ9BXA7 367 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 NT5C1AQ9BXI3 368 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 RANBP17Q9H2T7 1088 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ARHGEF28Q8N1W1 1705 aaKnown RBP17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ATF7IP2Q5U623 682 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 CATSPER1Q8NEC5 780 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 SCFD1Q8WVM8 642 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 TSPAN17Q96FV3 270 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 CCT8L2Q96SF2 557 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 ALG6Q9Y672 507 aa17.36■□□□□ 0.37
PCDHA1-203ENST00000504120 FAM47DPA6NHR8 397 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 PDHA1P08559 390 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ACTN3Q08043 901 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 SMAD1Q15797 465 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 CATSPER3Q86XQ3 398 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 SH2D3CQ8N5H7 860 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ISCUQ9H1K1 167 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ALG13Q9NP73 1137 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 PRMT7Q9NVM4 692 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 GOLGA8RI6L899 631 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 IL10P22301 178 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 TROAPQ12815 778 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 LRRC23Q53EV4 343 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 IER5Q5VY09 327 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 CHST13Q8NET6 341 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 C9orf72Q96LT7 481 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 NIF3L1Q9GZT8 377 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 IL25Q9H293 177 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 C17orf75Q9HAS0 396 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 USP15Q9Y4E8 981 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms