RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 APOL5Q9BWW9 433 aa22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 C2orf16Q68DN1 1984 aa22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 DOCK6Q96HP0 2047 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 PPEF2O14830 753 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 HOXB8P17481 243 aaPredicted RBP22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 MCM4P33991 863 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 CYP2J2P51589 502 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 SNRPFP62306 86 aaKnown RBP22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 PALB2Q86YC2 1186 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 CBWD2Q8IUF1 395 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 NECAB3Q96P71 396 aaPredicted RBP22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 CLSTN3Q9BQT9 956 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 S1PR5Q9H228 398 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 VCANP13611 3396 aa22.37■■□□□ 1.17
PDGFRA-203ENST00000503856 ZNF233A6NK53 670 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 CREMQ03060 361 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 KCNB1Q14721 858 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 C12orf76Q8N812 135 aaPredicted RBP22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 SUSD3Q96L08 255 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 FBXL18Q96ME1 805 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 TIGD1Q96MW7 591 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 PDE11AQ9HCR9 933 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 DPP3Q9NY33 737 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 CGNQ9P2M7 1197 aaKnown RBP22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 FAM50BQ9Y247 325 aa22.36■■□□□ 1.17
PDGFRA-203ENST00000503856 C5orf42Q9H799 3197 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 GLUD1P00367 558 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 SMAD2Q15796 467 aaKnown RBP22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 PDXDC1Q6P996 788 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 NT5DC4Q86YG4 428 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 XXYLT1Q8NBI6 393 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 RDH13Q8NBN7 331 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 ERCC4Q92889 916 aaPredicted RBP22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 UHRF1Q96T88 793 aaPredicted RBP22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 KCTD10Q9H3F6 313 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 KIAA1586Q9HCI6 787 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 DZANK1Q9NVP4 752 aa22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 USP15Q9Y4E8 981 aaPredicted RBP22.35■■□□□ 1.17
PDGFRA-203ENST00000503856 ANO9A1A5B4 782 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 PIRO00625 290 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 SYN3O14994 580 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 ADAM12O43184 909 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 SPATA31D3P0C874 917 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 TFAMQ00059 246 aaKnown RBP22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 SPATA31D4Q6ZUB0 917 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 ANKS3Q6ZW76 656 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 C12orf56Q8IXR9 622 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 FAM84AQ96KN4 292 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 MTRRQ9UBK8 725 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 MAPK8IP1Q9UQF2 711 aa22.34■■□□□ 1.17
PDGFRA-203ENST00000503856 DLL1O00548 723 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 TGM5O43548 720 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 AARSP49588 968 aaKnown RBP eCLIP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 LILRA4P59901 499 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 SNRNP35Q16560 246 aaKnown RBP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 VARS2Q5ST30 1063 aaKnown RBP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 RARS2Q5T160 578 aaKnown RBP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 LILRA6Q6PI73 481 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 RSPO2Q6UXX9 243 aaPredicted RBP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 GOLGA5Q8TBA6 731 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 CACTINQ8WUQ7 758 aaKnown RBP22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 MAN1C1Q9NR34 630 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 CDH22Q9UJ99 828 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 PCDHB8Q9UN66 801 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 PCDHA5Q9Y5H7 936 aa22.33■■□□□ 1.17
PDGFRA-203ENST00000503856 SPDYE4A6NLX3 237 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 M0QZQ0 153 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 PDXKO00764 312 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 SPTLC1O15269 473 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 KINO60870 393 aaKnown RBP22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 OR1D2P34982 312 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 LMBRD2Q68DH5 695 aaPredicted RBP22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 DSTYKQ6XUX3 929 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 FEZF2Q8TBJ5 459 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 SUSD6Q92537 303 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 IPO9Q96P70 1041 aaKnown RBP22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 ADAM7Q9H2U9 754 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 HOOK1Q9UJC3 728 aaKnown RBP22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 BACE2Q9Y5Z0 518 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 CDY1Q9Y6F8 540 aa22.32■■□□□ 1.16
PDGFRA-203ENST00000503856 TSC2P49815 1807 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 EXOC3O60645 756 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 KIF20AO95235 890 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 C1RP00736 705 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 WEE2P0C1S8 567 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 UBE2HP62256 183 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 ITIH3Q06033 890 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 MRPL58Q14197 206 aaKnown RBP22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 SURF1Q15526 300 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 GUF1Q8N442 669 aaKnown RBP22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 C1orf127Q8N9H9 656 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 APPL2Q8NEU8 664 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 SPATA20Q8TB22 786 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 GSDMAQ96QA5 445 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 INTS13Q9NVM9 706 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 DMAC2Q9NW81 257 aa22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 TIMM13Q9Y5L4 95 aaPredicted RBP22.31■■□□□ 1.16
PDGFRA-203ENST00000503856 PTPRJQ12913 1337 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms