RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TRIM72Q6ZMU5 477 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 SLC13A5Q86YT5 568 aaPredicted RBP24.01■■□□□ 1.43
PCDH1-204ENST00000503492 INO80BQ9C086 356 aaPredicted RBP24.01■■□□□ 1.43
PCDH1-204ENST00000503492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.01■■□□□ 1.43
PCDH1-204ENST00000503492 FAM187AA6NFU0 413 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 PTGIRP43119 386 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 ATF7IP2Q5U623 682 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 EEF1DP3Q658K8 133 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 CDR2LQ86X02 465 aaPredicted RBP24■■□□□ 1.43
PCDH1-204ENST00000503492 JAMLQ86YT9 394 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 CD302Q8IX05 232 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 EVPLQ92817 2033 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 ERP44Q9BS26 406 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 MINDY3Q9H8M7 445 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 ERAP1Q9NZ08 941 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 THAP12O43422 761 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 HOXC6P09630 235 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 CHRNA3P32297 505 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 HSD17B3P37058 310 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF132P52740 706 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 UAP1Q16222 522 aaPredicted RBP24■■□□□ 1.43
PCDH1-204ENST00000503492 DUOXA2Q1HG44 320 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 TTC27Q6P3X3 843 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 THNSL1Q8IYQ7 743 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 MAGOHBQ96A72 148 aaKnown RBP24■■□□□ 1.43
PCDH1-204ENST00000503492 C11orf70Q9BRQ4 267 aa24■■□□□ 1.43
PCDH1-204ENST00000503492 C22orf31O95567 290 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 ADORA2AP29274 412 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 MBTD1Q05BQ5 628 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 SIX1Q15475 284 aaPredicted RBP23.99■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF568Q3ZCX4 644 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 MAMDC4Q6UXC1 1216 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 CEP120Q8N960 986 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 LRRC45Q96CN5 670 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF408Q9H9D4 720 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 PLAAQ9Y263 795 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 PLXNA1Q9UIW2 1896 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 IGBP1P78318 339 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 SURF1Q15526 300 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 GTF3C2Q8WUA4 911 aaPredicted RBP23.99■■□□□ 1.43
PCDH1-204ENST00000503492 PCYOX1Q9UHG3 505 aa23.99■■□□□ 1.43
PCDH1-204ENST00000503492 PDHXO00330 501 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 IQCF3P0C7M6 154 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 INSRRP14616 1297 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 OSTNP61366 133 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 EFCAB13Q8IY85 973 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 ADAM22Q9P0K1 906 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 LGALS2P05162 132 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 RARAP10276 462 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 CCNA1P78396 465 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 TFAMQ00059 246 aaKnown RBP23.98■■□□□ 1.43
PCDH1-204ENST00000503492 PTP4A2Q12974 167 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 LAMC2Q13753 1193 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 CYP1B1Q16678 543 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 PHF13Q86YI8 300 aaPredicted RBP23.98■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF606Q8WXB4 792 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 MS4A4AQ96JQ5 239 aa23.98■■□□□ 1.43
PCDH1-204ENST00000503492 SRCAPQ6ZRS2 3230 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 MYO1FO00160 1098 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 ASAP2O43150 1006 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 ACTN2P35609 894 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 LIN9Q5TKA1 542 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 CDT1Q9H211 546 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 PLXNB2O15031 1838 aa23.97■■□□□ 1.43
PCDH1-204ENST00000503492 BTBD19C9JJ37 291 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 POTEJP0CG39 1038 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 MKRN3Q13064 507 aaKnown RBP23.96■■□□□ 1.43
PCDH1-204ENST00000503492 SGSM1Q2NKQ1 1148 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF484Q5JVG2 852 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 CCDC137Q6PK04 289 aaKnown RBP23.96■■□□□ 1.43
PCDH1-204ENST00000503492 MMS22LQ6ZRQ5 1243 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 TMC3Q7Z5M5 1100 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 VCPIP1Q96JH7 1222 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 NIF3L1Q9GZT8 377 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 ZDHHC18Q9NUE0 388 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 MTUS1Q9ULD2 1270 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 SCN4AP35499 1836 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 H0YGN5 161 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 CD58P19256 250 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 SLC1A1P43005 524 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 TMEM132AQ24JP5 1023 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 TMEM192Q8IY95 271 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 IFT122Q9HBG6 1241 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 TNFSF13BQ9Y275 285 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 NFS1Q9Y697 457 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 MGAMO43451 1857 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 ANK1P16157 1881 aa23.96■■□□□ 1.43
PCDH1-204ENST00000503492 B4GALT4O60513 344 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 PROSCO94903 275 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 GH1P01241 217 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 TMEM191BP0C7N4 346 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 MAMLD1Q13495 774 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 TRPC3Q13507 836 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 LLGL1Q15334 1064 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 PLEKHA7Q6IQ23 1121 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 SH2D3CQ8N5H7 860 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 VTA1Q9NP79 307 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 CISHQ9NSE2 258 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 RASAL2Q9UJF2 1139 aa23.95■■□□□ 1.43
PCDH1-204ENST00000503492 SNX24Q9Y343 169 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms