RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SULT2A1Q06520 285 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TEFQ10587 303 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SPP2Q13103 211 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DCTN2Q13561 401 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TMCO4Q5TGY1 634 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KLHDC10Q6PID8 442 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM184AQ6ZMB5 413 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LINC00299Q6ZSB3 139 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CYB5R4Q7L1T6 521 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TRPM8Q7Z2W7 1104 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SYT2Q8N9I0 419 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SLC17A8Q8NDX2 589 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R14CQ8TAE6 165 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DNAJC9Q8WXX5 260 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TIMMDC1Q9NPL8 285 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FANCLQ9NW38 375 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MYO1FO00160 1098 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF263O14978 683 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 B4GALT4O60513 344 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 DIAPH2O60879 1101 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 DCTN3O75935 186 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 AGTP01019 485 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 GJA8P48165 433 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 HCAR3P49019 387 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 MLECQ14165 292 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 KARSQ15046 597 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TEAD4Q15561 434 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 MAP7D1Q3KQU3 841 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD20A8PQ5CZ79 823 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 EARS2Q5JPH6 523 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 C6orf118Q5T5N4 469 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ARHGAP17Q68EM7 881 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 GRAMD4Q6IC98 578 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 SCAIQ8N9R8 606 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 NOA1Q8NC60 698 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ACRBPQ8NEB7 543 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 OXER1Q8TDS5 423 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 CTNNBL1Q8WYA6 563 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 HES6Q96HZ4 224 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 BOD1Q96IK1 185 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 NOX5Q96PH1 765 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM237Q96Q45 408 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ZWILCHQ9H900 591 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 KANSL2Q9H9L4 492 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 JMJD4Q9H9V9 463 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TMOD3Q9NYL9 352 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 GPRC5DQ9NZD1 345 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 STK26Q9P289 416 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 AMACRQ9UHK6 382 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PNMA3Q9UL41 463 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ACTL7BQ9Y614 415 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TRIP11Q15643 1979 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 GRXCR2A6NFK2 248 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 SPDYE3A6NKU9 549 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TARM1B6A8C7 271 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 KLF11O14901 512 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 WISP2O76076 250 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ATP6V1G2O95670 118 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PFKFB1P16118 471 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TTKP33981 857 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PPP3CAQ08209 521 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TBC1D10BQ4KMP7 808 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PCNX4Q63HM2 1172 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 EP400NLQ6ZTU2 488 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 NEK10Q6ZWH5 1172 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 OTOP1Q7RTM1 612 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ATXN2LQ8WWM7 1075 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 STMN2Q93045 179 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 IFT43Q96FT9 208 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 RBM17Q96I25 401 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 SEC16BQ96JE7 1060 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 NUP88Q99567 741 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R12CQ9BZL4 782 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ROPN1BQ9BZX4 212 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 THAP9Q9H5L6 903 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ROPN1Q9HAT0 212 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 INTS9Q9NV88 658 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 HACD3Q9P035 362 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 CFAP69A5D8W1 941 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 GABBR2O75899 941 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 KIF4AO95239 1232 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ATP5BP06576 529 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 VDRP11473 427 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 UNGP13051 313 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 VHLP40337 213 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 MAGEA1P43355 309 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 MYL6P60660 151 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 MRPS9P82933 396 aaKnown RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 SYCP2LQ5T4T6 812 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF746Q6NUN9 644 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R2P3Q6NXS1 205 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 ARMCX6Q7L4S7 300 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 FAM160B2Q86V87 743 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 PCYT2Q99447 389 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 SLX1AQ9BQ83 275 aa2.97□□□□□ -1.93
NEDD4-204ENST00000503468 TTLL2Q9BWV7 592 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms